Ricinus communis (castor bean): 8282162
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Entry
8282162 CDS
T01087
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8282162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8282162
03110 Chaperones and folding catalysts [BR:
rcu03110
]
8282162
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8282162
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8282162
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8282162
Messenger RNA biogenesis [BR:
rcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8282162
Chaperones and folding catalysts [BR:
rcu03110
]
Heat shock proteins
HSP60 / Chaperonin
8282162
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8282162
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8282162
Exosomal proteins of other body fluids (saliva and urine)
8282162
Exosomal proteins of breast cancer cells
8282162
Exosomal proteins of colorectal cancer cells
8282162
Exosomal proteins of bladder cancer cells
8282162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8282162
NCBI-ProteinID:
XP_002523404
UniProt:
B9SBN5
LinkDB
All DBs
Position
9:23236917..23241521
Genome browser
AA seq
605 aa
AA seq
DB search
MASTFTAMSSVGSLVAPNVDKKFASTSNRLSSFASISGSAFGRRQNVVLRRSRSPKICAM
AKDLHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEV
ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGI
EKTSKALVTELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSRVGRKGVVTLEEGK
SAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEDAI
RGGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVV
REEVGLSLDKVGKEILGNASKVVLTKDTTTIVGDGSTQEAVTKRVAQIRNLIEAAEQDYE
KEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLR
LASKVDAIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPRFGY
NAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEAVPAGNPMDN
SGYGY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacctttactgctatgtcttcggttgggtccttagttgctcctaatgtggat
aagaaattcgcctctacttcaaataggttgtcatcttttgcctcaatttctggaagtgca
tttggtaggaggcaaaatgtagttctacgtagatcgcgatctcccaagatttgtgccatg
gcgaaggatttgcatttcaacaaggatggatcagcaattaaaaagttgcaaactggtgta
aacaaacttgcagatctagttggggttacccttggacctaaaggccgaaatgttgttctt
gagagcaagtatggctccccaaaaattgttaatgatggtgtgactgtcgctaaagaggtt
gaattggaggatccagttgagaatattggtgcgaagttggtaagacaggcagccgccaag
acaaatgacttggctggtgatggcaccacaacatctgttgttcttgctcaaggccttata
gctgaaggtgtcaaggttgttgctgctggtgccaaccctgtattgattactaggggtatt
gagaagacctcaaaggctctagtgactgaacttaagtctatgtctaaagaggttgaagac
agtgagcttgcagatgtagcagctgttagtgcaggaaacaactatgaagttgggaatatg
atagctgaagctatgagtagagtgggtcgaaagggtgttgtgacacttgaagagggaaaa
agtgcggagaacagcctctatgttgtcgagggaatgcaatttgatcgtggttatatctca
ccttattttgtgactgacagtgaaaaaatggcagttgaatatgagaactgcaagttgctt
cttgttgacaaaaaaataacaaatgcaagagatctcattaacattctggaagatgcaatt
agaggtggataccctattttgataattgctgaagacattgagcaggaggctctagcaaca
cttgttgtgaataagcttaggggtgctttgaagattgctgctcttaaagctcctggtttt
ggagagcgcaaaagccagtatcttgatgacattgctattttaactggaggaactgttgtc
agagaggaggtagggctttcattggacaaagttggcaaggagatcctaggcaatgcatct
aaagtggttctcaccaaggatactactacaattgtgggtgatggaagcactcaagaggcg
gtaactaaaagagttgcacaaattagaaatctcattgaggctgctgagcaagactatgag
aaggaaaaactcaatgagagaattgcaaaactgtcaggtggtgttgctgtgatacaggtt
ggagcacaaactgagacagagcttaaagaaaagaagttgagagttgaagatgctctcaat
gcaacaaaggcagctgtggaagaaggtattgtagttggtggtggatgcaccctactgagg
cttgcatcaaaggtggatgccattaaggatagccttgacaatgatgaagaaaaggttgga
gcggatattgtgaagagagctcttagctatccactcaagctgattgccaagaatgcggga
gtaaatggaagtgtggtcagtgagaaggtgctctctagtgacaatccaaggtttggatac
aatgccgcaactgggaactatgaagatctaatggctgctgggatcattgatccaactaag
gtggttagatgttgcctggagcatgcatcatctgtagcgaagactttcttgatgtctgac
tgtgtagttgtggaaatcaaggagcctgaagcagtgcctgcaggcaatcccatggacaat
tcaggatacggatactaa
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