Ricinus communis (castor bean): 8282319
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Entry
8282319 CDS
T01087
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Module
rcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8282319
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
8282319
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
8282319
NCBI-ProteinID:
XP_048234486
UniProt:
A0ACM4D7U6
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Position
8:complement(10280846..10283522)
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AA seq
393 aa
AA seq
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MDLYTLFLVLCMASLSSSKVPGLLNVVDFGAAGDGRKDDSQAFMQAWQAACKATQEIILK
VPATRTFLLKPVKFIGPCRSPRIHFWIQGDIVAPSQISEWSTPYMDSWIVFVNVNGLGVV
GSGQIDGRGSDWWDCAVKTQCPRPMGMKFHFCKNIQIGGLKIINSPSRFLSVSHCDDVLI
SNLKIINPETSPNTDGMDLTHSTNIHVKDCHISTGDDCIAILSGCSHINITGVSCIQGHG
ISIGSMGNHGDYDTVEEVHVRNCTFGPALNGAHIKTWQGGSGYVRNVLFENITLLNTSNP
INIDQYYCPRGNCAEQASAVKVSGITFTKFKGSSFTDPAINIACSETVGCSNIVLDNIDI
TPSSGIKKVGSKCINAHGRSGSTVPSVDCLSKY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatctttacactctattcctggtcttgtgcatggcttcattgagttcaagcaaggtt
cctggtcttctaaatgtagttgattttggagctgctggagatggaagaaaagatgattct
caagcttttatgcaagcatggcaagcagcatgcaaagctacacaagaaattattctgaaa
gtgccagcaacaagaacgtttttactaaagccggtgaaatttatcggtccatgcaggtcc
cctagaattcacttttggattcaaggggatatagtagcaccaagtcaaatatcagaatgg
agtacaccgtacatggatagctggattgtctttgtaaatgtaaatggactcggtgttgtt
ggcagtggacaaattgatggccgtggctctgactggtgggattgtgcagtgaagactcag
tgccccagacctatgggcatgaaattccatttctgcaaaaacattcaaatcggaggattg
aaaataataaacagtccatctaggtttctgtctgtatctcactgtgatgatgtgttaatc
tccaaccttaaaattattaaccctgaaacaagccctaatactgatggcatggatcttact
cactccaccaacatccacgttaaggactgtcacatatccacaggtgatgactgcattgca
attctttctggctgctcccacattaacataactggggtatcatgcattcaaggccatggt
ataagtattggtagcatgggaaatcatggagattatgacacagtggaagaagtacatgtg
agaaattgtacttttggaccggctttaaatggagcacatatcaagacatggcagggagga
tctggatatgtcaggaatgtcctatttgaaaatattacattgttaaacacttccaatcca
atcaatattgatcaatattactgccccagaggcaactgtgctgaacaggcaagtgccgtc
aaagtaagcggtattacattcacaaaattcaaaggaagttcgttcacagacccagcaatc
aacatagcttgcagtgaaactgtagggtgctctaatattgtacttgataacatcgacatt
actccttcaagtggaatcaagaaggttggatcaaaatgcatcaatgcccatggaagatct
ggctccactgttccttcagttgattgtttatccaaatattag
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