Ricinus communis (castor bean): 8282420
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Entry
8282420 CDS
T01087
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8282420
Membrane trafficking [BR:
rcu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
8282420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
bL31_N
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
8282420
NCBI-ProteinID:
XP_048235083
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Position
9:10042515..10058021
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AA seq
1262 aa
AA seq
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MANYLAQFQSIKNSCDHIVIAVEDVSDLWPNIKDRFEERLPFKKACLNNKTRNSVFVENL
PAEFILTTDARLRSRFPQEQSLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVYVSRAHPSNDNATKMAKKVYAKIEVDFSTKKRERCCKFDLHGPEATFWEDFESKI
MECLKNTLDRRVQFYEDEIRKLSEQRFMPIWNFCNFFILKESLAFMFEMTHLHEDALREY
DELELCYLETVNMAGKQRDFGGVDRGDDQAALLNPENKPLTQIVQDDSFREFEFRQYLFA
CQSKLLFKLNRPFEVASRGYPFVISFSKALTLHESMLPFCLREVWVITACLALIDATASH
YNSGVVAPDIEKEFYRLQGDLYSLCRVKFMRLAYLIGYGTDIERSPVNSASLSMLPWPKP
AVWPSVPPEASPQVLVKEKVILQATPRIKHFGIQRKSLPLEPSVLLREANRRRASLSAGN
MFEIFDGRPSLIDGSASDASPGTSPLNKANISMSRTNSSPGNFDGSIDRPMRLAEIYVAA
EHALERTISDADLWKSLSSVEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVCFR
HGNFDLASKSYEKVCALYAGEGWQELLADVLPNLTECQKMLNDQAGYLSSCVRLLSLDKG
LFSIKERQAFQAEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDGDPGTLSVTVWS
GFPDDITLDSLSLTLMATFNADEGAKALRSSAATVLMPGRNTITLALPPHKPGSYILGVL
TGQIGQLRFRSHSFSKGGPADTDDFMSYEKPTRPILKVFKPRPLVDLTAAVSSALLINET
QCVGIIVQPIDYSLRGAVLQIDTGPGLRIEESHFIEMESCANTSHSAPDMANMNTTQNNY
SVVANKECERLSLHNGRIQFPDWASDVDSVIWIPVCAISDTLPKGSTSATPQRQSIVDGM
RTIALKLEFGVSHNQIFERTIAVHFTDPFHVSTRVADKCNDGTLLLQVILHSQVKATLTV
YDAWLELQDGFVHTGQGDGRPTSSFFPLVISPTSRAGILFSICLGKMSGEDFSFIDVEAR
QPESILNIRYGISGERTVGAHPPVSVESVGPEAARQDLIFKSALILQRPVLDPCLAVGFL
PLPSASLRVGQLVTMKWRIERLKGSGDDQISEHDGEVLYEVSANSENWMIAGRKRGHVSL
STEQGSRIVISILCVPLVAGYVRPPRLGLPNVDESNISSNPPGPHLVCVMPPTLSSSFCI
PA
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattatctagctcagtttcaatctatcaagaactcttgcgatcacatcgtaatt
gcagtcgaagatgtgagtgatctttggcccaatatcaaagatagatttgaggagagactg
ccatttaaaaaagcttgtctaaataacaagacgaggaactctgtgtttgtggagaatctg
cctgccgaattcatattaaccacggatgcaagacttcgtagtcggtttcctcaggagcaa
tcattgttttggtttcgagaaccatatgcaactgtggttcttgttacatgtgaggatctt
gatgaattcaaaaccatccttaaaccacgcctgaaattaattgtccaaaatgatgaacgg
gaatggtttattgtatatgtgtctagagctcatccaagtaacgataatgccaccaaaatg
gcaaaaaaagtgtacgccaagattgaagttgattttagcacaaagaaaagggagaggtgc
tgtaaatttgatcttcatggacctgaagcaactttttgggaagatttcgagtccaaaatt
atggagtgcctaaagaatacattggataggcgtgtacaattttatgaggatgaaatccgt
aagctcagtgaacagcgcttcatgccgatttggaacttctgtaatttttttatactgaag
gaaagccttgcttttatgtttgagatgactcatcttcatgaagatgcactacgtgaatat
gatgaattagaactctgctatctggaaacagttaatatggctgggaagcaaagagacttt
ggtggagtagaccgtggtgatgatcaggcagctctgctcaaccctgaaaataaaccattg
acacaaattgttcaagatgactcctttagagaatttgagtttaggcagtatctctttgcc
tgtcaatcaaagcttttgttcaagctgaatcgaccctttgaggttgcatcaaggggttat
ccatttgtaatcagcttttctaaagccctcacactgcatgagagtatgctgcctttttgt
ctgcgagaagtttgggtgataactgcttgcttggctttaatcgatgcaactgcttctcat
tataatagtggagttgtggctccggacattgaaaaggagttctaccgtcttcagggtgat
ctttattcactatgtcgagttaagttcatgaggctcgcatatttaattggatatggaaca
gatatagaaagaagtcctgtcaacagtgcttcacttagcatgctaccttggcccaaacct
gcagtttggccgtcagttccacctgaagcttctcctcaggtgcttgtgaaggaaaaggtg
atccttcaggcgactcctagaattaaacactttggcattcaaagaaaatcattgcctctt
gaaccttcggtacttttgcgtgaggcaaatcggcgtagggcatccctttctgctgggaac
atgtttgaaatattcgatggtcggccaagcttgattgatggatcagcttcggatgcatca
ccagggacgtcccccttaaataaagcaaatatttctatgtcacgaactaactcttctccc
ggaaactttgatggctcaatagatcgacctatgaggcttgctgagatatatgttgctgct
gagcatgctcttgagcgtacaatttctgatgctgacttatggaaatccttgtcatctgta
gaagagtttgagcaaaaatatcttgagctgaccaaaggtgctgcggataattaccatcgt
tcctggtggaaaagacatggcgtggtcctggatggtgaaatagcagctgtttgcttcagg
catggaaactttgatctggcttcaaagtcatatgagaaagtttgtgccctgtatgctggt
gaaggatggcaggagttattggctgatgtccttccaaatttaaccgagtgtcagaagatg
ctcaatgatcaagctggctacttatcatcctgtgtcagactgctgtctttagataaaggt
ttattctcaatcaaggagcgacaggcttttcaggcagaggttgttcgtcttgcccacagt
gagatgaaggatcctgtgccgttagatgtctcatcattgattacattttctggaaatcct
ggacctccactggagttatgtgatggggatcctggcactctctctgtaactgtttggagt
ggttttcctgatgatataactcttgattcacttagcctcaccttgatggctacatttaat
gctgatgaaggtgctaaggcactaaggagctctgctgccacggtgctgatgcctggtagg
aatacaattaccctcgctttaccaccccataaaccagggtcctatatcttgggggttctt
actgggcagattggtcaactgaggtttagatcacatagtttctccaagggtggccctgca
gatactgatgattttatgagttatgaaaaaccaactagacctatcttaaaggttttcaaa
ccaagacctctggttgatctcactgcagctgtttcatctgctttgctaataaatgaaact
cagtgcgttgggattatagtgcagcccattgactattccctcagaggtgctgttttgcaa
attgatactggtccaggtctgaggattgaagagtcacattttattgagatggagagttgt
gccaatacatcgcacagtgctccggacatggcaaacatgaatacaactcaaaacaattat
tctgtggttgctaataaagaatgtgagcgattaagtcttcataatggtaggatacagttt
cctgattgggcaagcgatgtggattctgttatttggattcctgtttgtgcaatcagtgac
acacttccaaaaggatcaacttcagccactcctcagagacagagcattgtggatggtatg
agaacaatagcattgaaactagaatttggagtatcacacaaccagatatttgaaaggact
attgctgtgcacttcactgaccctttccatgtgagcacacgtgttgcagataaatgcaat
gatggtactctgcttctgcaggtgatattacactctcaagtgaaggccacattgaccgtc
tatgatgcttggcttgaactccaagatggatttgttcatactggacaaggtgatggaaga
ccaacatcaagcttctttccactcgtgatttctccaacatctagagcaggaatcttgttc
agtatttgcctagggaagatgagtggtgaagacttttcgtttatagatgtagaggcaagg
cagccagagagcatattgaatatcagatatggaatttctggtgagagaacagttggagca
catcctcctgtgtctgtggaatcagttggacctgaggctgccaggcaggacttgatcttc
aagagtgctcttatactgcaaaggcctgtgcttgatccatgcctagccgttggttttctt
cctcttccttctgctagcctgagagttgggcaacttgttaccatgaaatggaggattgaa
aggttgaagggttctggcgatgatcaaatttctgaacacgacggtgaggtgttatatgaa
gtcagtgcaaattctgaaaattggatgattgctgggaggaagagagggcatgtttctctc
tccacagagcaaggttcgaggatagttatctcaatattatgcgtgcctctggtagctggt
tatgttcgtcctcctcgacttggactgccaaatgttgatgaatcaaatattagtagcaat
cctcctggcccccatctggtttgtgtcatgcctcctactctgagctcttccttttgcatc
ccagcgtga
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