Ricinus communis (castor bean): 8282426
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Entry
8282426 CDS
T01087
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03440
Homologous recombination
rcu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8282426
03450 Non-homologous end-joining
8282426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8282426
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8282426
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
8282426
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
8282426
BRCA1-C complex
8282426
NHEJ (non-homologous end-joining)
MRX complex
8282426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF5320
API5
Motif
Other DBs
NCBI-GeneID:
8282426
NCBI-ProteinID:
XP_002525759
LinkDB
All DBs
Position
9:complement(9931251..9945546)
Genome browser
AA seq
734 aa
AA seq
DB search
MGDLSSEDISNMLRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEQKQVDFLLLGGD
LFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMALEGSGVGQITLYPILVRKGSTAVA
LYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCELSDWFNILVLHQNRVKTNPKNAINEH
FLPRFMDFIVWGHEHECLIDPQEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLTSVRPFEYAEVVLKDENDIDPNDQSSILEHLDKVVNNLIEKSNKKAVSRSE
LKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASRKGQGQAKIDDSERLR
PEELNQQNIEALVAESNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLQETRNKIA
KDSDTIKFEKEDIILKVGECLEERVKERSMHSKDAPQISSSAHSIEDFRSIGTAGVGSAV
SFSDDEDTTQLSGSKASSRNQKGSRLVSRPSYDDASEADKGKTSTRGRGRGRGRGRGRGR
GRGSNNLKQTTLDVSLGFRQSQRSASVAATAAVRSIADEEENVESASSEDAENRINEVGD
SSDDAERIPGKGGKRAAPIGRGRGGPSKRGKKSDNSAIQRMLMGKDDDDDDDDAAKRLNK
SQPRITRNYGALRR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttgtcaagtgaggatatttcaaatatgcttcggatacttgttgcaactgat
tgtcacttgggatatatggagaaggatgaagtacggcggcatgattcttttcaggcgttt
gaagagatttgttcaatagcagagcaaaagcaggtggacttcttacttcttggtggtgat
cttttccatgaaaataagccctcgaggtcaacattagtcaaggccattgagattctccgt
cgtcattgcctcaatgatcgacctgtgcagttccaagttgttagcgaccagactgtgaat
tttgcaaatagatttggccatgtaaattatgaagacccccacttcaatgttggcttacca
gtgttcagcatccatggaaatcatgatgatcctgctggagtggacaacctttcagccgtc
gatattctctcagcatgcaatcttgtaaactatttcgggaaaatggctcttgaaggctct
ggtgttggtcaaattacactctatcctatccttgttaggaagggttcaacagctgtggcg
ctctatggtcttggaaacattagggatgaacgactcaatagaatgtttcagacaccacat
gctgtgcaatggatgagacctgaatctcaagaagggtgtgaactgtctgattggttcaac
atattggtgcttcaccagaacagagtgaagacaaatccaaagaatgcaataaatgaacac
ttcctaccaagatttatggacttcatcgtgtgggggcatgagcatgaatgtcttattgat
cctcaggaagttcctggtatgggatttcacatcacacaaccaggttcttcagttgcaaca
tcactaatcgatggagagtcaaagccaaagcatgtgctgcttctagaaattaagggaaac
caatatcgcccaaccaagatacctttgacctcagtgaggccttttgaatatgcagaggtc
gtcttaaaggatgaaaatgacattgatcccaatgatcagagttctattcttgaacatttg
gataaagtggtcaacaatctgatagagaaatctaataaaaaggctgttagcagatcagag
ctaaagcttccattagttcgagtaaaggtagattactctggatttatgacgataaatcct
caaagatttgggcaaaagtatgttgggaaggttgcaaatcctcaagatattcttatattt
tcaaaggcttcaaggaagggtcagggacaagctaagattgatgattctgaacgccttcgc
ccagaagagctaaatcaacaaaacatagaagctttggtagctgaaagtaatctgaaaatg
gagattcttccagtcaacgatttggatgttgcgctgcacaattttgttaacaaagatgac
aaaatggcattctattcttgtgtgcagtacaatcttcaagaaacccgtaataaaattgcg
aaggattcagacacgataaagtttgaaaaggaggatataattctcaaagttggagaatgt
ttagaggaacgtgtcaaggaaaggtctatgcactctaaggatgctccacaaatttcatct
agtgcacattccatagaggatttcagaagtataggtactgcaggagtcggaagtgcagtt
tcctttagtgatgatgaagacacaacacaactatctggttcaaaggcctccagtagaaac
cagaaaggatcaagattagtttctaggccttcttatgatgatgcttcagaggccgataaa
ggtaaaacttctacaagaggaaggggtaggggcagaggcagaggcagaggccgaggccga
ggccgaggctcaaataatttgaagcagacaacccttgatgtatctcttggatttcgccag
tctcaaagatctgcatcagttgctgcaacagcagcagttagaagtattgctgatgaagag
gaaaatgtggaatctgcttcaagtgaagatgctgagaatagaatcaatgaagttggggac
agttcggatgatgctgaaagaattccaggcaaagggggaaaaagagctgctcctatagga
agaggtagaggtggtccatcaaagcgaggaaagaaatcagataattcagcaattcagaga
atgctcatgggcaaggatgacgatgacgatgatgatgatgcagcaaagcgattaaataag
tctcaacctcggataacaaggaattatggagctttaagaaggtaa
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