Ricinus communis (castor bean): 8283306
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Entry
8283306 CDS
T01087
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic isoform X2
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8283306
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
8283306
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
8283306
NCBI-ProteinID:
XP_002521878
UniProt:
B9S7A9
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Position
5:11750274..11756322
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AA seq
589 aa
AA seq
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MATSSSSVPFFGIRDDEQNQMKQQHSSTPTSSSAQAQAPAAQKKKRNQPGMPNPDAEVIA
LSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTC
VHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCG
TLFSRRDSFITHRAFCDALAQESARNPPTNLNTIGSHLYGGSNMSLGLSQVNTQISSMQD
QSSDILRLGGGSRTGQFDHLLPSSMGGSVSFRPSPPQPMPSPAFFMQEPNQNYHDEHQAQ
QGLLQNKPFHHGLMQFAELHNTTNTNPPASNIFNLSFLSNSSTTSSITNSNNANNSNNSL
LMSNQFSNQNGASGGGDGSTMFSNHIMGDHHQMNSGVPSLFTSSVQKDNTVPHMSATALL
QKAAQMGSTSSTYSASLLRSFGSSSSSTGMKSAAANFGEIFSENDQNNLHDLMNSFAATG
NSSIFGHGQENPYGTSGGNLEEAKMHQGLNASIGGSDRLTRDFLGVGQVVRSMSGGFSQR
EKQRQPPQQQQQQQGIDMGGSSLDSERNIAAAAAAAPTSQSFGGSGNFQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcttcttcatcagtacctttctttggaattagagatgatgagcaaaaccag
atgaaacaacaacattcctcaacaccaacttcatcttcagctcaagcccaagctccagct
gcccagaagaaaaagagaaaccaacctggaatgccaaatccagacgcagaggtgatagca
ctatctcccaagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaaggg
ttccaaagggagcaaaacctacagctccacagaagaggacataacctgccttggaagcta
aagcagaagactacaaaagaagtgaagaggaaggtctatttgtgccctgagcccacatgc
gtccaccatgacccttctagggctcttggtgatcttactggtatcaagaaacattattct
agaaaacatggtgaaaagaaatggaagtgtgagaaatgctctaagcgttatgctgttcaa
tctgattggaaagctcattctaaaacttgtggcactcgagaatacagatgtgactgtggc
actctcttctcaaggcgtgacagttttatcactcatagagccttttgcgatgcattggca
caagagagtgctagaaatcctcctaccaacttgaacacaattggcagtcacttgtatgga
ggtagcaacatgagcttaggcttatctcaagtgaatactcaaatttcatcaatgcaagac
caatcaagtgacattttacgccttggaggaggtagccggaccggacaatttgatcatctt
cttccttcatcaatggggggttcagtgtcatttcgaccatcaccaccacagcccatgccc
tcacctgctttcttcatgcaagaaccaaaccagaattatcatgatgaacaccaagctcaa
caagggctgttgcaaaataaaccatttcatcatgggctaatgcaattcgctgaacttcat
aacaccaccaacaccaatcctcctgcgtcaaatattttcaacctcagctttctttccaat
agcagcacaacaagcagcattactaacagcaataatgccaacaactcgaacaacagtctg
ctaatgtccaaccagttcagcaaccaaaatggtgccagtggcggcggcgacggatcaact
atgttttcaaaccacataatgggtgatcatcatcaaatgaattcaggtgtaccttctctc
tttacatcatcggttcaaaaagataacacagtacctcatatgtcagctacagcactactt
caaaaggcagctcaaatgggttcaacttcaagcacttatagcgcctcattgctaagaagc
tttggtagctcatcatcttcaactggaatgaaatcagcagcagcaaactttggtgagatt
ttcagtgaaaacgatcagaacaatcttcatgacctaatgaattcatttgctgccactgga
aattcttcaatttttggacatggacaagaaaacccttatggtactagtggtggcaatctt
gaagaagcaaaaatgcatcaaggtttgaatgcaagtattggtggatctgatagattgaca
agagactttcttggagttggacaagtagttagaagtatgagtggaggtttctcacaaaga
gagaaacagcgacagccaccacagcagcagcagcagcaacaaggcatagatatgggtggc
tcttccttggattcagagagaaatattgctgctgcggctgcggcggcgccgacaagccaa
tcttttggaggaagtgggaattttcagtga
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