Ricinus communis (castor bean): 8283443
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Entry
8283443 CDS
T01087
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8283443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8283443
Membrane trafficking [BR:
rcu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
8283443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
8283443
NCBI-ProteinID:
XP_002530015
UniProt:
B9SVJ6
LinkDB
All DBs
Position
5:complement(8584031..8590929)
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AA seq
1450 aa
AA seq
DB search
MGHLNLQSEINSFQREFCDCPVISTKGAVACMVNSEIGAVLAVMRRNVRWGVRYVTDDDQ
LEHTLIHSLKELRKQIFSWQHKWHSINPAIYLQPFLDVICSDETGAPITGVALSSVYKIL
TLDLLDVNTVNVAEAMHLIVDAVTTCRFEVTDPASEEVVLMKILQVLLACMKSKASVKLS
NQHVCNIVNTCFRVVHQASSKGELLQRIARHTMHELVRCIFSHLHDIENNEDKLTSGSSS
IDREVDTLVKDKTSGSKQPENGEIGVEGDGQLSIGDAPGVRMGKRESGKDENKIEVSNGM
ESAENGEKLMMEPFGVPCMVEIFHFLCSLLNVVEHIEVGPRSNPIAYDEDVPLFALGLIN
SAIELGGPSFSKHPALLCLIQDELFRNLMQFGLSMSPLILSTVCSIVLNLYHHLRIELKV
QFESFFSCVLLRIAQSKHGSSYQLQEVAMEALVDLCRQQAFMAEMYANFDCDITCSNLFE
DLANLLSKSAFPVNGPLSAMHVVALDGLISMIKCMADRMGNELSLSEETSVDLEGHNSFW
TMKSESNTDPNYWIPHVRKMRSIKRTLMIGVDHFNRDPKKGLEFLQGMHLLPEKLQPQSV
ASFFRYTAGLDKSLIGDYLGNHDDFCIQVLQEFAGTFDFRGMSLDTALRLFLGTFRLPGE
SQKIQRVLEAFAERYYEQSPQVLADKDAALVLSYSLILLNTDQHNVQVKKKMTEEDFIRN
NRRTNGGKDFPREYLSDLYRSICENEIQMIPEQGAGLPLMTSGRWINVLHKSKITSPFIV
CGSRALLDYDMFIILSGPTIAAMSVVFDQTEHEEVLNSCVDGFLAIAKFSASYHLDEVLD
DLVVSLCKFTTHMTSLSVDDAILTFGDDTKARMATTTVFTIANRYGDYIRSSWKNILDCV
LSFHRLGLLPAQLASDAADDIELSSDLERVKPSPVSSLSHTPSGTTPRKSSGGLMGRFSQ
LLSFDMEEPRSLPTEEQIAAHQLTRETIHSCHIDSIFTESKFLQAESLLQLVRSLILAAS
RLGKGTSPMEDEGAAAFCLELMIAITLNNRDRIMLIWQDVYEHISNVVQSTIMPCTLVER
AVFGLLKICQRLLPYKENLSDELLKSLQLILKLDARVADAYCEQITQEVMRLVKANASHI
RSHVGWRTITSLLSITARHPEASETGFETLTFIMSNGAYLLPSNYILCVDAARQFAESRL
GDVDRSVSALNMMAGSVVCLTRWSSEAKIAVGQEAAMKVSQDIGEMWLRLVQGMRKVCLD
HREEVRNHAILMLQRSMAGVDGIHLPNALWFQCFDLVIFTLLDDLLDISLESSPKNYRKM
EETLVLAMKLMTKAYLQQLHDLSQQPSFCRLWLGVLNRMERYMKVKFRGKHSEKIYELVP
ELLKNILFVMKTTGVLLPSDDIGGDSFWQLTWLHVKNICPSLQSEVFPDHELEQIHPEQN
VPAQSSESTV
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggggcatctgaatctgcagtcagaaataaattcatttcagagagaattctgtgactgt
cctgtaatatctactaaaggtgccgtagcatgcatggttaactctgaaataggagccgtt
ctggctgtgatgaggagaaatgtaaggtggggagttcgctatgtcacggatgatgatcaa
ctggagcacactctcattcactccttgaaagaattacggaaacagatcttttcatggcag
cataagtggcacagtatcaacccagccatctatctccagccatttctggatgtaatttgt
tctgatgaaactggtgcaccaatcacaggagttgctttgtcttccgtgtacaaaatatta
actcttgatttgcttgatgttaatacagtcaatgtggcagaggctatgcatctgattgtt
gatgctgtgacaacctgtcgctttgaggtgactgatccagcctctgaagaagtggtgctg
atgaaaattcttcaggttctcttggcatgcatgaaaagtaaagcatcagtcaagttgagt
aatcaacatgtatgcaatatagttaatacatgttttcgggttgttcatcaagcaagctcc
aaaggagaattattgcagaggattgctcgccatacaatgcatgaattagttagatgtatt
ttttctcacctacatgatatagagaacaatgaagacaaattgactagtggaagctcatct
attgacagagaggttgatacactggtcaaggacaaaacttctggaagtaaacagccagag
aatggagaaatcggggttgaaggtgatggtcaactatcaattggggatgctccaggtgtt
cgcatgggtaagagagagagtgggaaggatgaaaacaagatagaggttagtaatgggatg
gagtctgctgaaaatggtgagaaacttatgatggagccttttggagtcccttgcatggta
gagatttttcattttctgtgttctcttctgaatgtcgttgagcatattgaagttggtcct
agatcaaatcctattgcatatgatgaagatgttcctctatttgctttgggtttaattaat
tcagccattgaattgggtggtccctcattcagcaaacacccagcattgctatgtttaatt
caagacgaattgtttcgtaatctaatgcagtttggtctgtcaatgagtccactaattctt
tcaacagtatgcagcatagttctcaatctgtaccatcatttgcgtattgaactgaaagta
cagtttgaatctttcttctcttgtgtgcttttgaggatagcacaaagcaaacatggttct
tcatatcaactgcaggaggttgccatggaggctctagttgacctctgcaggcagcaggct
ttcatggctgaaatgtatgctaattttgattgtgacataacctgcagtaatctgtttgaa
gacctggctaacctgctatcaaagagtgcatttccagtaaatggacctttgtcagcaatg
catgttgttgcactagatggtctgatatccatgattaagtgtatggctgatcggatgggc
aatgagttgtcactttcggaagagacgtcagtagatcttgagggacataattcattctgg
acaatgaaaagtgaaagcaatacagaccctaattattggattccacatgtccgtaagatg
agaagcattaagagaacattgatgattggtgtagatcactttaaccgggatcctaagaag
ggtctagagtttctccagggaatgcatctgttgcctgagaagcttcagcctcagagtgta
gcatcctttttccggtacacagctgggttagataagagtctcattggagattatctagga
aatcatgatgacttctgtattcaggtgcttcaggaatttgctggaacttttgattttcga
ggaatgagtttggatactgcattgcgtcttttcttaggaactttcagattgcctggagag
tcacagaaaatacagagggtacttgaagcatttgctgagagatattatgagcagtcccct
caggtattggcagacaaggatgctgctcttgtcttgtcttattcacttatactgcttaat
acagaccaacacaatgtacaagttaagaaaaagatgactgaagaagattttatccgcaac
aatcgacgcactaatggagggaaagattttcctcgagaatacctttcagatctgtatcgt
tcaatctgtgaaaatgaaatccagatgattcctgaacaaggtgctggtcttccgttgatg
acatcaggtcgctggattaatgtactgcacaaatccaaaattacaagtcctttcattgtt
tgtggttctagagccctcctcgactatgacatgtttattatcctgtcaggtcccacaatt
gctgctatgtcagtggtttttgatcagacagagcatgaagaggttttaaattcatgtgtc
gatggattcttggcaattgccaaattttctgcatcctatcatttggatgaggtattggat
gatttggttgtttctctctgcaaattcactacccacatgacttcgttgtctgttgatgat
gctattttgacatttggagatgacactaaagcaaggatggcaactacaacagttttcact
attgcaaaccgatacggtgattacatccgctctagctggaaaaacatattggattgtgtc
ttgagctttcacaggcttggccttctacctgctcagcttgctagtgatgcagctgatgat
atcgagctctcatctgacctggagagggtaaagccttccccagtttcttccttatcccac
acaccatctgggacaactcctcggaaatcatctggcggtttgatgggccggttcagccag
ctcttatcttttgatatggaggagccaaggtcactgccaacagaggaacagattgctgct
catcagttaactcgtgaaaccatacatagttgccacattgatagtatattcacagagagt
aaattcctccaagctgagtctttgttgcagcttgtgaggtcacttatcctggctgctagc
cgtctaggtaagggaactagtcctatggaagatgaaggtgctgcagcgttctgcttggag
ttgatgattgcaattacactcaataatagggataggatcatgcttatttggcaagacgtt
tatgagcatatatccaatgttgttcaatcaaccataatgccatgcactctggtggaaagg
gccgtgtttgggctccttaagatatgccagcggttacttccctataaggaaaacctatca
gatgaactcctcaagtcattgcagctaatattgaaacttgatgcgcgtgttgctgatgct
tattgtgaacaaatcacacaagaagttatgcgtctggtaaaagcaaatgccagtcatatc
agatctcatgttggttggcgtacaatcacctccctcctgtccatcacagctcgacatcca
gaagcgtcagaaactggatttgagacgctaacatttatcatgtctaatggggcatacctt
ttgccatccaactatatcctttgtgttgatgctgcaagacagtttgctgaatctcgattg
ggggatgttgaccggtctgtttctgccctaaatatgatggcaggttctgttgtttgtctg
acaagatggtcttctgaggctaagattgcagtggggcaggaggctgctatgaaagtgagt
caagatattggagaaatgtggctgaggctggtgcaagggatgaggaaagtgtgtctggat
catagagaagaggtgaggaaccatgctattctaatgttgcagaggtctatggcaggagtg
gatgggattcaccttccaaacgctctgtggtttcagtgttttgatcttgtgatcttcaca
ttgcttgatgacttgttggacatttcactggagagctctccaaagaattatcggaaaatg
gaggaaacacttgtattggccatgaaactaatgacaaaagcatacttacagcaattgcat
gatctgtcacagcaaccgtccttctgtagactatggttaggagtccttaatcgtatggag
agatacatgaaggtgaaattccgaggaaaacatagtgagaagatatatgaattagtccct
gagcttctcaagaacatcctgtttgtgatgaagacaacaggagttctcttgccaagcgat
gatattggtggggacagtttttggcagttgacgtggttgcatgtgaagaatatatgccca
tctttgcaatcagaagtgtttccagatcatgaattagagcaaattcatccggagcagaat
gtacctgctcaatctagcgagtcgacagtgtga
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