Ricinus communis (castor bean): 8283873
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Entry
8283873 CDS
T01087
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00510
N-Glycan biosynthesis
rcu00513
Various types of N-glycan biosynthesis
rcu01100
Metabolic pathways
rcu04141
Protein processing in endoplasmic reticulum
Module
rcu_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
8283873
00513 Various types of N-glycan biosynthesis
8283873
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8283873
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_2nd
Ribophorin_II_C
Motif
Other DBs
NCBI-GeneID:
8283873
NCBI-ProteinID:
XP_048232537
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Position
7:complement(23580512..23588403)
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AA seq
704 aa
AA seq
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MRRLTLLARMARSGVGGFLVLLVVALICSVSSSASISYPISDSHRSAALELFTPIGGSFG
SLEEAYEALRTFEVLGIDKKPDISVPACHSVLETLGSSSAVSKDIFYALKVNGILKCEVN
EDVLEGIVSNLQTAVSSASSLLDFYHSIGSLVLIKDQSSKDVSFEDAEGVFRSIKALSQS
DGRWRYSFNNPESSTFAAGLALEALAGVISVSSSEIDQSLIATTKNDILKLFDSIEKYDD
GAFYFDEKHAQENQGPLSTTSSVVRGLTAFADVTSGNLNLQLPSEKFVGLAKFLLGIGIP
GDAKDLFNQVDSLAYLESNRISIPLILSLPATVLSLTKKDTLKVKVNTVLGSNAPPLTVN
LVRVFSSGSKDTSIIENQELKYDTENSVYFLDALPKSVDVGNYIFVFETVFHDAAHEKVY
TTGGQTQVPIFVTGVIKVDSAGIDVLESDLGIVETQRKLDLAGENLVSLSANHLQKLRLS
FQLTTPLGHAFKPHQAILKLRHETKVEHIFVVANSGKKFEIVLDLLGLVERFFYLSGSYT
IQLTVGDAVMENSFLKVIGHVDLDLPEAPENAPRPPPQPVEPYSRYGPKAEITHIFRAPE
KLPPKELSLTFLGLTLLPFIGFLVGLLRLGVNLKNFPSSAVSATFAFLFHFGIAAVLFLY
VLFWLKLDLFTTMKTLGFLGVFLMFVGHRILSHLASTSSKLKSA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcggagactcactctacttgcacgaatggctaggagtggtgtaggtggatttcttgtg
ctgctcgttgtagccttgatctgctctgtttcttcttctgcttcgatttcttatccgatc
tctgattctcaccgatccgctgctttggagctctttactccgatcggtggatcattcgga
agcttggaagaagcatatgaggcacttcggacatttgaggttcttggaattgataagaag
cctgacataagtgtcccagcatgccactctgtacttgaaactcttgggtcttcatctgct
gtctctaaggatatattctacgcattaaaagtgaatggaatattaaaatgtgaggtcaat
gaggatgttcttgagggcattgtttccaatcttcaaactgctgtcagcagtgcaagttcg
ttgcttgacttctaccattccataggaagtctggtgcttatcaaggatcaatcttctaaa
gatgtaagctttgaagatgctgaaggagtttttcgttctatcaaggctttgagccagagt
gatggaagatggcgctatagttttaataatcctgagtctagcacctttgctgcaggttta
gcacttgaagctcttgctggagtgatctcagtatcatcttctgagatagatcagtctctg
attgctacaacaaaaaatgatatattgaagctttttgacagtattgagaagtatgatgat
ggagccttttactttgatgagaagcatgcacaagaaaatcaagggcctctttcaactaca
tcatccgttgttagaggattaacagcatttgcagatgtgacctcaggaaatttgaatctc
cagcttccgagcgaaaaatttgtgggtttggcaaagtttctcctaggcattgggattcct
ggtgatgctaaagacctattcaatcaagtagactccttggcttacctggagagcaatagg
atctccattcccttgattctgtcacttccagcaacagtgctttctttgactaagaaggat
acactgaaggttaaggtgaatactgtgcttggctcaaatgctcctcctctgacggtgaat
cttgtaagagttttcagttctggttcaaaggatacttccataatcgagaaccaggaactc
aaatatgacactgaaaattcagtctatttcttggatgctctgccaaagagtgttgatgtt
ggaaattacatttttgtctttgagactgtgtttcatgatgctgcacatgaaaaagtttat
accaccggaggccaaactcaagttccaatatttgtcacgggagttatcaaagttgacagt
gctggaattgatgtccttgaaagtgatcttggaattgtagaaactcaaagaaagctagat
ttagctggagaaaatcttgtatcattatcggcaaaccacctccagaagctgcgactgtct
ttccaattgaccactcctcttggccatgcttttaagccacatcaggcaattcttaagttg
agacatgagaccaaggttgagcatatctttgtcgtggccaactctggaaagaagtttgag
atagttctggatttacttggactggttgagagatttttctatctgtccggtagctatacc
atccagcttactgttggtgatgctgtcatggagaattccttcttaaaggtcattggtcat
gttgacctagacctaccagaagcacctgagaatgcaccccgtccacctccacagcctgtt
gaaccatactcgagatatggtccaaaagcagagataacccacatcttcagggcaccagaa
aagctcccacctaaggagctctctctcactttcttgggtctcacacttttgccgttcatt
ggatttttagttgggctcttacggctaggggtgaacctgaagaactttccttcttcagct
gtatctgccacgtttgccttccttttccattttggaattgcagcagttctgttcctctac
gtgcttttctggctgaagttggatcttttcacgacaatgaaaacacttggtttcttggga
gttttcttaatgttcgttgggcacagaatcctttctcacctggcctcaacatcatccaag
ttgaaatctgcttga
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