Ricinus communis (castor bean): 8283884
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Entry
8283884 CDS
T01087
Name
(RefSeq) serine/threonine-protein kinase ATG1c isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
8283884
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rcu01001
]
8283884
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8283884
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8283884
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
8283884
Protein kinases [BR:
rcu01001
]
Serine/threonine kinases: Other
ULK family [OT]
8283884
Membrane trafficking [BR:
rcu04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
8283884
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
8283884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
ATG1-like_MIT2
Kdo
Pkinase_fungal
APH
YrbL-PhoP_reg
Tub_N
Motif
Other DBs
NCBI-GeneID:
8283884
NCBI-ProteinID:
XP_015581270
LinkDB
All DBs
Position
10:4913421..4920622
Genome browser
AA seq
721 aa
AA seq
DB search
MAQAPGRGRVVGEYLVGRQIGSGSFSVVWHARHRVHGTEVAIKEIATSRLNKKLQESLMS
EIFILKRINHPNIICLHDIIEVPGRINIILEYCKGGDLSMYIQRHGKVPEAIAKNFMQQL
AAGLQILRDNNLIHRDLKPQNLLLSTTDSNAVLKIADFGFARSLQPRGLAETLCGSPLYM
APEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNIVKSTELQFPSDSKDL
SAECKDLCQKLLRRNPVERLTFDEFFNHSFLSQKNVDESLRNRRFAKSVESFPLCESNSE
RNMEDISPEDCLPFFLDDDSSGPDGSPSFSRRRSSMKSTYGFSLDTRVDGKEAKSNVLNN
TVFAHTYSSTRNNLENTSLKPEISKFPDDNLHEPPKFMNQRSINARSRVVDSLELIDQDY
VLVSGPPLDGSSSSASASKPSHIPSKLPSPQATINLNTAPMPITCTVNSNMCHVGSLDSP
SSAPGTSHGSTDIGDVLEQPSTHCMTRIKSLQQCAAAISELVHEKVESGKQLEAFSIQLV
ILAIWKQALHICHTRAASAIEDSSSQESTRLRRSGSKKHGTPDIEDCPDSVTENISTQIE
REFLREVEHAEELAKAIKPGNIEMPDAMETIFQSALAVGRHGGVEELMGDMEGASFLYSK
AVRLLVFLLVEAPSLILNPPFSLTNSDRYRLRTYIDFLNNRQSHSRCQRMALLKCEEQCP
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaccgggaaggggcagggttgttggagagtacctggtaggtaggcaaatc
gggtcgggttccttctcggtggtttggcatgctaggcaccgagttcatggaactgaggtg
gcgataaaagagatagccacgagtcgactcaataagaagttgcaagagagtttaatgtct
gagatctttattctgaagaggattaatcatcctaatattatttgcttgcatgatatcatt
gaggtcccggggagaataaatattatattggaatattgcaagggaggtgatctttctatg
tatattcaacggcatggaaaagttcctgaagcaattgctaagaacttcatgcagcaacta
gcggctggtttacaaatcctccgggataataatcttatacatcgggatctgaagccacag
aatctcctcctttccaccactgacagcaatgcagtactgaaaattgctgattttggattt
gctagatctctgcaacctagaggccttgcagaaaccttgtgtggttcacccctttacatg
gctccagagataatgcaacttcagaagtatgatgctaaggcagatctctggagtgttggt
gccattttattccagcttgtaactggaaaaacaccattcactggaaacaatcaaatacag
ttgctccaaaatattgtgaagtccactgaactgcaatttccttctgatagtaaagatttg
agtgctgaatgcaaagatttgtgccaaaaattgctgcgtcgtaatccagtggaaaggctg
acatttgatgagttttttaaccactcattcctttcccagaagaatgtggatgaatcattg
aggaataggaggtttgcaaaatcagttgaaagttttccattgtgtgaaagcaattctgaa
aggaatatggaggacatttctccagaggattgtttaccgttcttcctggatgatgattct
agtggtcctgatggtagcccttccttttctaggaggaggtcctcaatgaagtccacctat
ggattttctttagatacaagagttgatggaaaggaagctaaatcaaatgttttgaataac
acagtttttgctcatacatattctagtaccagaaacaatttggaaaatactagtcttaag
cctgaaatcagtaaatttcctgatgataatctacatgaacctccaaaattcatgaaccaa
aggtcaataaatgcccgatctagagttgtggattcattagagttgatagatcaagattat
gttcttgtatcgggtccacctttggatgggtcttcttcgtcagcaagtgcttccaaacca
agccatataccgtcgaagttgcccagtcctcaagcaactatcaatttaaatactgccccc
atgcctataacttgcactgttaacagtaatatgtgccatgttggaagcttggacagtcca
agctctgctcccgggacttctcatggatcaacagatattggagatgttttggagcagcca
tcaactcattgcatgactaggattaaatcattacaacagtgtgcagctgccatctctgaa
ctagttcatgaaaaggttgagtcaggtaagcaactggaagcattctcgatacaacttgtt
attctcgcaatttggaagcaagcactgcatatttgccatactcgagctgcctcagctatt
gaagacagctcaagccaagaaagcacaaggttaagaagaagtggcagcaagaagcatggg
actccagatatagaagattgtccagatagtgtgacagaaaatatatccactcagattgaa
agggaatttttacgggaagttgagcatgcagaagaacttgccaaggccatcaaacctgga
aatatcgagatgcctgatgcaatggagacaatatttcaatctgcccttgctgtgggaaga
catgggggagttgaagagctgatgggtgacatggaaggtgcatcttttttatattcaaaa
gcagtacgtttattagtctttcttctggtggaagcgccttccctcattcttaacccgccc
ttttctctcacaaactcagaccggtataggctccgaacatacattgattttctcaataat
aggcagagccattcgaggtgtcaaaggatggcacttctcaaatgcgaggaacaatgccca
ccgtag
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