KEGG   Ricinus communis (castor bean): 8283906
Entry
8283906           CDS       T01087                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rcu01009]
    8283906
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rcu03036]
    8283906
Enzymes [BR:rcu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     8283906
Protein phosphatases and associated proteins [BR:rcu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     8283906
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    8283906
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 8283906
NCBI-ProteinID: XP_048228942
LinkDB
Position
4:20797245..20806352
AA seq 1056 aa
MEQFKSIPESHIKEDLSFKHSPKSDNIHEGSGSPRNRKVIARWNPIEACRPSIDEAPVFY
PTVEEFEDTLGYISNIRAKAEPFGICRIVPPLSWRPPCRLKEKDIWENAKFSTRIQQVDL
LQNREPMRKKFRSRKRKRRRHSKMGASRRRATSCSEANAASEADEKFGFQSGSDFTLEEF
QKYADHFKACYFGVMDSMEDVKPGIEHQKLEPSVEEIEGEYWRIIEQPTDEVEVYYGADL
ETGTFGSGFPKASSMAIEGDSDQYFDSGWNLNNLPRLPGSVLCFEESDISGVLVPWLYVG
MCLSSFCWHVEDHHLYSLNYLHWGEPKIWYGVPGSHAANLENAMKKHLPDLFEEQPDLLH
ELVTQLSPSVLKAEGVPVYRVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAH
GQYAVELYNKQHRKTSISHDKLLLGSAQEAVQALWELLHLGKETPGNLRWRNVCGKDGLL
TQAVKTRVQMEEERLQNLPTHLKLQKMEKDFDLGNERECFMCFYDLHLSAASCKCCPEQF
ACLKHAKDFCSCENDESYVLVHYTVDELNRLVEALEGSLDAIKVWISKEFRLVSEADNGA
HECKVEQKCDLFQNNYCEQSESPSCSPRTEELLGTNISCSNSQVSSEVTQSNSHDHIFNN
DAMILKNKPVVKKESCIDLNLDFMSVDHENESFDASNSSGNKVRSDVETNKSRGKQDNVS
NSDTAKGKDLPQVDRDCNSSELHELSNEDHPSSYSPLVGDTCGCSKKLFGVDLSVPLSSV
VQSESLETRTINSSHVRLSITDLVNLSYNFGSFVEPINFGSIMLGKLWCSKQVIFPKGFR
SRVQFLSVLDPRKSCSYISEIVDAGLLGPLFKVSLEEYPSETFTNVSAEKCWEMVLQRLN
EEIMRRNTLGERGLPPVLPLQSINGLQMFGFSTSPILQAIEALDSNHQSVDYWKNRLVNL
STTSEVKQSLIGLGCNPVDPEDKIGNNVMTKYPDNLNAQGHSDEEEEVQHIVRGLFKKAN
SEELKIMRKVLCSDTQSAERRAALTTLMEEIQKTSR
NT seq 3171 nt   +upstreamnt  +downstreamnt
atggaacagtttaaatcgattccagaatcccatatcaaggaggatctatcttttaagcat
tctccaaaaagtgacaacatacatgagggttcagggagtccacgaaatagaaaggtaata
gccagatggaatccaattgaagcttgcagacctagcattgatgaagcaccagtattttat
cctacagttgaggaatttgaggacacacttggttatatatcaaatatacgtgcaaaagca
gagccattcggtatatgtcgaattgtccctccactttcatggaggccaccttgtcgtctt
aaggagaaagatatatgggaaaatgctaaattttctacacgaattcagcaagttgacttg
cttcaaaacagggaacccatgagaaagaaatttcgaagccggaagcgaaaaaggaggcgg
cattcaaaaatgggagcatccaggagacgtgccacttcttgttcagaagcaaatgctgct
tctgaggctgatgagaaatttggtttccaatcaggatcagacttcacacttgaggaattt
cagaaatatgctgatcactttaaagcatgttactttggagtgatggactcaatggaggat
gtaaagcctgggattgaacatcagaaattggaaccctctgtggaggaaattgagggtgaa
tactggcggattattgagcagccgacagacgaggttgaggtatactatggagctgatttg
gaaacaggaaccttcggaagtgggtttcctaaggcttcatcgatggcgattgaaggtgat
tcagatcagtattttgattctggttggaacttaaacaatctcccacgcctgccaggttct
gtgctatgttttgaagaaagtgatatctcaggagttctagttccttggctgtatgttgga
atgtgcttatcatcattttgttggcatgttgaggaccatcacctatattcactaaattac
ttacactggggcgagccaaagatatggtatggagtacctggaagccatgctgccaatttg
gagaatgcaatgaaaaagcatttacctgatttatttgaagaacagcctgatttactccat
gaactggtaactcaactatctccttctgttctaaaagctgagggtgtaccagtataccga
gttgtccagcactctggggagtttgttcttactttccccagggcgtaccactctggcttc
aactgtggcttcaactgtgcagaagcggttaatgtagctcctgttgattggttagcgcat
gggcaatatgcagttgagctctacaataagcagcatcgaaagacatcgatatcccatgac
aagctactactgggatcagctcaggaagcagttcaggccctttgggagctattacatctt
ggaaaggaaactcctggaaatttgaggtggagaaatgtctgtggaaaggatgggctactt
acccaagcagtaaagacaagggtacagatggaggaggaaagattgcagaaccttccaact
catttaaaattgcaaaagatggaaaaagactttgatttgggtaatgagagagagtgtttc
atgtgcttctatgacttacacttgtcagctgccagctgcaagtgctgccctgaacaattt
gcgtgccttaaacatgcaaaggatttttgttcatgtgaaaatgacgagagttatgtcctt
gtccattatacggtagatgaattaaatagactagttgaagcactggagggaagtttggat
gctataaaagtgtggatttctaaagaatttagattggtttctgaggctgacaatggtgct
catgaatgtaaggtggaacagaagtgtgatttgttccaaaacaactattgtgagcagagt
gaaagtccgtcttgttccccaagaacagaggaattactgggtaccaatatctcttgttca
aatagtcaagtttcttcagaagtgacacagtccaatagccatgatcacatctttaacaat
gatgctatgatcctgaagaataaacctgtggtcaagaaagagagttgcattgatttgaat
cttgattttatgtccgttgatcatgaaaatgagtctttcgatgcatctaatagctctggt
aacaaagttagatcagatgtagagacaaataagtcgagaggtaagcaagataatgtcagc
aattcagacacagcaaaaggaaaagatttaccacaagttgatcgtgattgtaattcatca
gaattgcatgaattatcaaatgaagaccacccttcatcatattcaccacttgtgggggat
acttgtggatgtagtaaaaagttgtttggagttgatctttctgttccactgtcttcagtg
gttcaatcagaaagccttgaaacaagaacaatcaatagttcacatgtcagactatccata
actgacctagttaacctatcctataactttggttcatttgttgaacctataaattttggt
tctattatgcttggaaagctttggtgcagtaagcaggtcatattccccaaaggatttaga
agtcgagttcaattcttgagcgtgcttgatcccaggaaatcttgtagctatatttcagaa
attgtggatgctggactccttggccctctttttaaggtatctttggaagaatacccaagt
gaaacatttacaaatgtttcagcagagaagtgctgggaaatggtgctgcaacgactgaat
gaggaaatcatgcgaaggaacaccctaggagaaagaggtctgcctcctgtgctgcctttg
caaagtattaatgggcttcaaatgttcgggttttccacatcacccattcttcaggctatt
gaggctcttgattcgaatcatcagtctgtggactactggaaaaataggcttgtaaatttg
agcaccacaagtgaagtcaagcaatccctgattggactgggttgcaatcccgtagaccca
gaggataaaattggcaataatgtgatgacaaaatatccagacaatctaaatgcacaaggt
cattcagatgaagaagaagaagtgcagcacattgtgcgaggactattcaagaaagcgaat
tccgaagagctaaaaataatgcgtaaggttttgtgcagcgatacacaaagtgctgaacgg
agagctgcattaacaacattgatggaggagatccagaaaacaagtagataa

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