KEGG   Ricinus communis (castor bean): 8283932
Entry
8283932           CDS       T01087                                 
Name
(RefSeq) polyadenylate-binding protein 7
  KO
K13126  polyadenylate-binding protein
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03015  mRNA surveillance pathway
rcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    8283932
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8283932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8283932
   03041 Spliceosome [BR:rcu03041]
    8283932
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     8283932
   mRNA cycle factors
    Stress granule specific factors
     8283932
Spliceosome [BR:rcu03041]
 Complex C
  Other components
   Complex C specific factors
    8283932
SSDB
Motif
Pfam: RRM_1 MLLE Nup35_RRM_2 RRM_occluded RRM_10
Other DBs
NCBI-GeneID: 8283932
NCBI-ProteinID: XP_048225667
LinkDB
Position
10:15383773..15389281
AA seq 590 aa
MAVPSTISATATASLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVN
FISPEDAIRAIETKNHTPLNGKLMRVMWSHRDPDARRNGIGNVYVKNLSESIDNVGLQEL
FGEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVGKFVKKS
DRVLPSPDAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFE
NPDDARWAMERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVK
NIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGYMF
HRKPLYVAIAQRKEERQAQLQLQYAQRIAGFHGPSTPVIPGGYTPLYYTAPSQVHPRPGM
MYQPLAMRPGWRGNGFAPPSRPVFQPSHLPVMPISQRQHKQGRVRMNGHVLPQGGTQSVS
YVQQPAQPLTSLKDPSNQRAGQAKYVPNGRTCDVSKGSGVLSAAPNSTGPVSQGSEVLSS
MLAAASPDEQKQILGEQLYPLVRKHKVIQKKFTSSVMRIKLGLLMFNDTF
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggcggttccatcgacgatatcggcgacggcaacggcgtctctttacgtcggtgagcta
cactgcgacgtgagtgatggacaacttgttgatgcattctcagagtttaatactcttgcg
tccgttcgtgtttgtagagactcttctactggcaggtctctttgttatggttacgtcaac
tttatctctcctgaggacgctattcgggccattgagacaaagaatcacactcccttgaat
ggaaagctgatgagggtcatgtggtcccaccgtgatcctgatgcaagaagaaatggaata
ggaaatgtgtatgttaagaatttgagtgagtcaattgataatgtggggcttcaagaacta
tttggcgaatttgggactgttctgtcttgtaaagtcgctacttttgaggatgggaagagt
aaaggccatggttttgttcaatttgagtccgaggattctgcaaattctgctattgagaag
ctaaacggctccattgttggtgataagcagatatatgtcggaaagtttgttaaaaagagt
gaccgagttttgccaagccctgatgctaaatataccaatttatatgtgaaaaacttggat
cctggcatcacagaagagcttctgcaagagaagttctctgaatttgggaaaattgttagc
gtggcgattgcaagggatgaatgtgggagctcaagaggattcggctttgtcaatttcgaa
aatccagatgatgctagatgggccatggaaagaatgaacggcacagagcttggttcaaag
gttctctatgtaggaagggcacaaaagagagcagagcgtgaacagattttgcgccgtcaa
tttgaagagaaacgcaaggagcagatcacaaaatttaagggctcaaatgtatatgtaaaa
aacattgatgatgatgtcactgatgaagagctgagagaacatttcagccaatgtggtaca
attacatcagcaaaacttatgaaagatgataaaggaagaagtaaggggtttggatttgta
tgcttctccagctctgaggaggccagtaaagccgtgaacacttttcatggatatatgttt
caccgcaagccattatatgtggctattgctcaaaggaaggaggaaagacaagcacaattg
caattgcagtatgctcaaagaatagctggattccatggaccatccactcctgttattcct
ggcggatatactcccctttactacacagctccttcacaagtacatccaaggcctgggatg
atgtaccagcctttggctatgaggccaggatggaggggtaatggctttgcacccccaagc
agaccagtctttcaaccatcacatcttccagttatgcctattagtcaaagacagcacaag
cagggcagagtgaggatgaatgggcatgttcttcctcagggtggtactcaatctgtctca
tatgttcaacagcccgctcaaccactaacttcattaaaagatccaagcaaccagcgagct
gggcaggccaagtatgtacccaatggtcgtacatgtgatgtaagcaaaggatctggagtc
ttatctgctgctcccaattccactggtccagtgtctcaaggatcagaggtgctgagtagc
atgcttgctgctgcttcccctgatgagcaaaaacagattttaggggagcagctttaccca
cttgtccggaagcataaggtaattcaaaaaaaatttacttcttcagtaatgcggataaag
ctaggtcttcttatgtttaatgacacgttttaa

DBGET integrated database retrieval system