Ricinus communis (castor bean): 8283953
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Entry
8283953 CDS
T01087
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8283953
03015 mRNA surveillance pathway
8283953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8283953
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8283953
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
8283953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_34
Phage_186_Dhr
Motif
Other DBs
NCBI-GeneID:
8283953
NCBI-ProteinID:
XP_002519437
UniProt:
A0ACK6AVX7
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All DBs
Position
10:15249934..15253716
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AA seq
503 aa
AA seq
DB search
MADDTKTATTTAAETEAKPQVAEIKRSWGDVADDEEEEEEQSETATTAASTSKEKGVSEL
GVDKLKIEDDNREEKELDEPDDSRIQAVTSGDTPYTSAATFEDLNLSPELLKGLYVEMKF
QKPSKIQAISLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPKNSRTQALCICPTR
ELSLQNLEVLRRMGKYTGISSHCAVPMDKGNNDRPKPLSYISAQVVIGTPGTIKKLLSLR
KLSISDMKVLVFDEADQMLAKEGFQDDSLRIMKDIQRFSPSCQVLFFSATFNEDVKNFVS
RVVKQGSNQLFVKKEELSLDAVKQYKVYCPDEMAKVLVIKDRILELAEKLGQTIIFVKTR
RSASMLHQALVDLGYEVTTIHGALNVEDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVN
LVINYDLPVKYGTSEPDYEVYLHRIGRAGRFGRKGVVFNFVMFDSDSTIMEKIDRYFGTR
VTEIPSWNSEEDFTVALQSAGLM
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacaccaagaccgccacaaccacggcggcagagacagaagctaagccgcag
gtggctgagattaaacgatcctggggcgatgtagctgacgatgaagaagaagaagaagaa
cagagcgaaactgctactactgctgcttccacatctaaagaaaagggagtatcggaatta
ggagtggataaattaaaaattgaggatgataacagagaagagaaagagttagatgaaccc
gatgattccagaattcaagctgttacatctggtgatacaccatatacatcagctgctaca
tttgaagatttaaacttatcgccggagctattaaagggtttatatgtggagatgaaattt
caaaaacccagcaaaattcaagcaatcagtcttcctatgattttaactccaccttataaa
gatttggttgctcaagctcataatggttctggtaaaacaacttgttttgtattggggatg
ttaagccgtgttgatcctaagaattcaagaacacaagctctttgcatttgtcctacaaga
gaattatccctgcagaatctggaagttcttcggagaatgggaaagtacacagggattagt
tcacactgtgctgtaccaatggacaaaggaaacaatgacagacctaaacccctgtcatat
atatctgctcaagtagtaattggtacgcctggcaccataaagaaacttttgtcactgagg
aaattgagcattagtgatatgaaagttcttgtttttgatgaggctgatcagatgctggcc
aaggagggctttcaagatgactccttgaggataatgaaggatattcaaagattcagtcct
agctgccaggttcttttcttttctgccacctttaatgaggatgtcaaaaattttgtatca
cgggttgtgaagcagggatccaatcaactctttgtgaagaaagaagagctatccttagat
gctgtaaagcagtacaaggtgtattgccctgatgagatggccaaggttctagtgataaaa
gacagaattcttgaactagctgagaaattggggcagacaattatatttgttaaaacaaga
cgcagtgctagcatgttacaccaggcacttgtagacttgggttatgaagtaaccaccatt
cacggtgcactcaatgtggaagatcgagacaagatagtcaaagaatttaaagatggttta
actcaagttctgatatcgactgatgttcttgcccgagggtttgatcaacagcaggttaat
ttggttatcaattatgaccttcctgtaaagtacgggacttcggagcctgattatgaggtt
tacttgcataggattggtagggcagggcgttttggtcgtaaaggggttgtcttcaatttt
gtgatgtttgacagcgatagtacgatcatggaaaaaattgatagatattttgggacccga
gtgacagagataccatcctggaacagcgaggaggattttacggttgctctacaatcagcc
gggttgatgtaa
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