Ricinus communis (castor bean): 8284132
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Entry
8284132 CDS
T01087
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8284132
04121 Ubiquitin system [BR:
rcu04121
]
8284132
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8284132
Membrane trafficking [BR:
rcu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8284132
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8284132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
DUF1117
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
8284132
NCBI-ProteinID:
XP_015575493
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All DBs
Position
1:complement(35589827..35591565)
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AA seq
411 aa
AA seq
DB search
MSSATATTSYWCYRCTRFISVLPSEENPDISCPHCDGGFIEEIETSNSQSDNPHRRFMYM
LPENNNNNNSSGSRRSRHGLGRIPTLRFRRNNGDRSPFNPVIVLRGSTASPEENSEEGGN
NSSYEFYYDDGSGSGLRPVPASMSEFLMGSGFDRLLEQLAQIEVNGFGRVGNPPASKAVV
ESMPIVDVTDAHVAAEAHCAVCKEAFELGSEAREMPCKHIYHSDCILPWLALRNSCPVCR
FEMPTDVESSDNSSNSNNNINSTEESEEIVGLTIWRLPGGGFAVGRFTGGRRGGGEREFP
GVFTEMDGGFSGGNAPPRRVSWVSRSSRGRESSGSGGGGSGFGLRRVFRGLVSLVRRIGS
NSSSTSRTSPDSEMGSISRSNSSHSSSGFGRYVSRRRRGLDLEVENGTDRW
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcgacagcaacgacgtcgtattggtgttacagatgcactcgctttatctcc
gttctaccctcggaagaaaaccccgatatctcgtgtcctcactgtgacggtggattcatc
gaagagatcgaaacaagcaattctcagtctgacaaccctcatcgtcggttcatgtacatg
ctacctgagaataacaacaacaataatagtagtggcagtagaagaagccgacacggtctg
ggtcggatcccgactctcagatttcggcgtaacaacggcgatcgttctccgtttaatcca
gttatagtcctgcgtggaagcacggcatcgcctgaagaaaacagcgaagaaggaggaaac
aatagtagttacgagttttactacgatgatgggtccgggtcgggtttgagacccgtaccc
gcaagtatgtcggagtttttgatgggatctgggtttgataggctgttagagcagttagca
cagatagaagtgaacggatttgggagggttgggaatccaccggcgtcgaaagcggtagtg
gagtcgatgccaattgtcgacgtaaccgacgcgcatgtggctgccgaggcgcactgcgca
gtttgtaaagaggcgtttgagcttggtagcgaagcgcgtgagatgccgtgtaagcatatt
tatcattctgattgtatattgccttggttagctttgagaaattcttgccctgtttgtcgg
tttgagatgcctacagatgtcgaaagctctgataatagtagtaacagcaataataacatt
aatagtacggaggagtcggaggagattgtgggcttgactatatggagattaccgggaggc
gggtttgctgtggggaggtttactggtggaagaagaggaggaggagaaagggagtttccg
ggagtgtttacagagatggatggtgggtttagtggtggaaatgctcctcccaggagggtg
tcttgggttagtagaagtagcagaggaagagagagtagcggtagtggtggtggtggtagt
gggtttgggttaagaagggtttttcgtgggttggtttcgttggtaaggagaattgggtcc
aattcttcttctacttcgaggactagtcctgattctgaaatgggttctattagtagaagc
aattcaagtcattcaagttctggttttggtagatatgtaagcagaagaaggagaggtttg
gatttggaagttgagaatgggacggatagatggtga
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