Ricinus communis (castor bean): 8284161
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Entry
8284161 CDS
T01087
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8284161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8284161
Spliceosome [BR:
rcu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
8284161
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
8284161
NCBI-ProteinID:
XP_002520562
UniProt:
B9S3J3
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Position
10:1159603..1165244
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AA seq
567 aa
AA seq
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MTTKRKDGGNIEIEGYNTSKRQRVGNEHNSPSSLQVIDNPLVPYNDVDDEEHYQRFEHNN
QSNGYQGLKEDDDDDDDDDDDDDDDDDDDDDDDDGQGSNQANRRNQLEPREDCPYLDTVN
RQVLDFDFERFCSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYINLQTEKV
YCLPDGYEIIDPSLDDIRHVLNPRFSRDQVEQLDRNRQWSRALDGSDYLPGMVGLNNIKE
TDFVNVTIQSLMRVTPLRNFFLIPENYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEF
LQAVMKASKKRFRIGQQSDPVEFMAWLLNTLHADLRTSKKNNSIIYDCFQGELEVVKEIP
SKAIAEKKENDDEQNSIQKTTDGGNEHDVVTETSRMPFLMLGLDLPPPPLFKDVMEKNII
PQVPLFNILKKFDGETVTEVVRPRVARMKYRVTRLPQYLILHMQRFKKNNFFIEKNPTLV
NFPVKNLELKDYIPLPMPKENLRLRSKYDLIANIVHDGKPNEGFYRVFVQRKSEELWYEM
QDLHVSETLPQMVALSEAYVQIYEQQQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaaaagaaaagatggtggtaatatagagattgagggatataatacctcgaag
aggcagagagtgggtaatgaacacaactctccttcatctttgcaagtcattgataaccca
cttgttccctacaatgatgttgatgatgaagaacattatcaaagatttgaacacaataac
caaagcaatggttatcaaggtctcaaagaggatgatgacgatgacgatgacgatgacgat
gacgatgacgatgacgatgacgatgacgatgacgatgatgatggacaagggtccaatcaa
gcaaaccgaaggaaccaacttgagcctcgtgaagactgcccttaccttgatacagtgaat
cgccaggtgttggattttgattttgagagattttgctctgtttctttgtcgaacttgaat
gtatatgcatgtttggtttgtggaaagtattaccaaggaagaggtagaaaatctcatgca
tacactcatagccttgaagcaggacaccatgtttacatcaatcttcagactgagaaagta
tactgccttcctgatggatatgaaattattgatccttcactagatgacatacgtcacgtt
ctaaacccaaggtttagcagggatcaagttgagcagcttgacagaaacaggcaatggtct
agggcacttgatgggtctgattaccttcctggaatggtgggtctgaataatattaaagag
acagattttgtcaatgtgactattcagtctctaatgagagttacacccttaaggaatttc
ttccttatccctgaaaactatcagcattgcagatctcctcttgttcatcgctttggagaa
ctcacaaggaagatatggcatgcgaggaactttaaaggacaggtgagcccacatgaattt
ctccaggcagttatgaaagccagtaaaaaacggtttcgcataggacagcagtctgatcct
gtggagttcatggcatggcttcttaatacgctacatgcagatcttaggacttcgaagaaa
aataacagcatcatttatgactgctttcagggggagttggaggtcgtgaaagagattcct
agcaaagctattgctgagaagaaagaaaatgacgatgagcagaacagcatacagaagacc
actgatggtgggaatgaacatgatgttgtcacagaaacttctagaatgccattcttgatg
cttggactggacttgccaccaccacctctatttaaagatgtgatggaaaagaatataata
ccccaggttcctctgttcaatattctgaagaaattcgatggtgagacagtgactgaagtt
gtccgccctcgtgtggcccggatgaaatatcgagttaccagattaccacaatatttaata
ctccacatgcagcggttcaaaaagaacaacttttttattgagaagaatccaaccttagtc
aactttccggtcaagaacttggaactgaaggattatattcctctgccaatgcctaaggag
aatttgagattgcggtcgaagtacgatttgatcgctaatattgttcatgatgggaaaccc
aatgaggggttctacagagtttttgtgcagcggaaatcggaagaattatggtatgagatg
caggatctgcatgtctctgaaactcttcctcaaatggttgcgctgtctgaggcatatgtg
cagatatatgagcagcaacagtag
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