Ricinus communis (castor bean): 8284184
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Entry
8284184 CDS
T01087
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8284184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8284184
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8284184
Membrane trafficking [BR:
rcu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
8284184
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8284184
Exosomal proteins of colorectal cancer cells
8284184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
HTH_10
DUF6865
Motif
Other DBs
NCBI-GeneID:
8284184
NCBI-ProteinID:
XP_002518467
UniProt:
B9RXJ8
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All DBs
Position
5:complement(31564241..31571852)
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AA seq
439 aa
AA seq
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MAGNNNFFPSASLTSSGRPVLLPNEVECQLLSAVDLEDEDVNANFSPLKSGVLILTTHRL
LWLPSNSISNSTATAIPLSFITCIFSSKKSIKSIFHSPRIRFQVSVHSKSLVVTLVLRGK
GDSDGFLAKFLESWNGRAWETDTGGSSSGDSAPTLVSGASSNSGGFYSSDGSVRMVGVAG
ILRKEQQMWESTDKSLQEAFQDLNALMSKAKEMMTLAEKMRQKLLSGSNSHSADTNEEMG
SKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKIPLERAGGMINLIDIYCLFN
RARGTELISPEDLLQACTLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEIFARIKALITRP
DALQAGITATDAAMTLGIAPAMAKEHLLTAESKGLLCRDISPDGFCFYVNLFSEIDSDDV
FLVKDHGVYSLWVRAVSAL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaacaacaatttctttccttcagcatccctcaccagcagtggtcgcccagtt
ctccttcctaatgaagtggaatgccaactgctttctgccgtggatcttgaagatgaggat
gtcaatgccaacttctctcccttaaaatcaggtgtgcttatcctcaccacccatcgcctc
ctctggctcccttccaattccatctccaattccactgcaactgctatccctctctccttc
atcacctgcatcttctcatccaaaaaatccatcaaatcaattttccactctccgcgcatt
cggttccaagtttccgtgcattccaaaagtctggtggtcacattggtgctcagaggaaag
ggtgattctgatgggtttttagccaagttcttggagagttggaatggaagggcttgggag
actgatacagggggttccagttctggtgattctgccccgactttggtttctggtgcaagt
tctaattctggtgggttttattcgagtgatgggtctgtgagaatggttggagtagcagga
atactgaggaaggagcagcagatgtgggaaagtacagacaagagcttgcaggaggctttc
caagacttgaatgcactcatgagcaaagctaaagagatgatgacgctcgctgagaaaatg
aggcaaaagctcttgtctgggtcaaattctcatagtgctgatactaatgaggaaatgggt
tctaaagaggagatgcaagattggttgctgagtgttggtatcatatctccagtgacaaaa
gagtctgcaggtgccctatatcaccaacaattgtcgagacagttggcagattttgtcaag
attcctttagagagagccggagggatgatcaatcttatagatatctattgtctctttaat
cgtgctcggggcacagaattgatctcaccagaggatttgttgcaagcatgtactctttgg
gagaaatttgatgtaccagtcatgcttcgtaaattcgatagtggagtcatggtcatccag
aataagtcccacagtgatgaggagatttttgctcgaatcaaagcccttatcacaaggcct
gatgccctccaagctggtataactgccactgatgctgcaatgactttgggtattgctcca
gctatggctaaagagcaccttctaactgctgaaagcaaaggtttgctatgcagggatata
agccctgatgggttttgcttttacgttaacctcttttctgaaatcgattctgatgatgta
ttcttggtgaaagatcatggtgtctattctttgtgggttcgagctgtatctgctttgtag
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