Ricinus communis (castor bean): 8284286
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Entry
8284286 CDS
T01087
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8284286
Spliceosome [BR:
rcu03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
8284286
Other components
Complex C specific factors
8284286
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
8284286
NCBI-ProteinID:
XP_002524028
UniProt:
B9SDF9
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Position
10:8849640..8852767
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AA seq
883 aa
AA seq
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MDDYQEMERFGMENDFEDGQWINGEFYYKNRKEKRKQTKDDVLYGVFADYSDSDDDYDGG
SSRKRKKDRDFGRKADLTKPVNFVSTGKVMPNQEIDISNNNNDSLKEETVDDDMFADDND
RVGLGAGLGSGLGFSAGLGFTNNGVKKTKGSMDSDGGGGEDEDEKNFLPTEFGRRIREGA
QRRERERLEKKEKGGLGGGRREVKGGDVGEFEKHTKGIGMKLLEKMGYKGGGLGKNEQGI
LAPIEAKLRPKNMGMGFNDYKETSAKLPQLEEEKKSVSISQSQSLSQGRAKERLWMKGRK
KKKEEYITAEELLAKKEEEGFHVVQKVLDMRGPQVRVLTNLDNLNAEEKARENDIPMPEL
QHNLRLIVDMVEVDIQKIDRDLRNERETAISLKNEKEKLEMEAARQKKQLDNMEEIMNML
SYIEEQNSSGTLTLDLLAKCFTDLRRKFADDYKLCNLSCIACSFALPLFIRVFQGWDPLR
NPLHGLELIELWKNVLQGDESNDIWDVGTPYTQLVSEVVFPAVRISGINTWEPRDPEPML
RFLESWEKSLPASVVQSISDNVVLPKLSSAVDSWNPQLETVPIHVWVHPWLPLLGQKLEY
LYEKIRMKLSMVLDRWEPNDTSAYTILSPWKTVFDSASWERLMCRFIIPKLEVALQGFEI
NPVDQKLDQFYWVMSWASAIPIHLMVDMMERFFFEKWLLVLYHWLCSSPNLQEVHQWYIG
WKGLFPPELQAHEHIRYQFTRGLQMIDKAIEGMEVVQPGLRDNLTYLRAQEQRQFEAQQR
AAVHAKQQSAMGMASTSQADSMGAGPQMTLKEVVEAHAQQHGLLFKPKYGRTFNGHQIYG
YGNISIYVDSVHLRLYAQKDEDWFLTSLDKLLEMHNKSFTKRR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggacgattaccaagaaatggagagatttgggatggagaacgatttcgaagatgggcaa
tggataaacggcgaattttattacaagaatcgcaaagaaaagcgcaagcagactaaagac
gatgttttgtacggtgttttcgctgattattctgattctgacgacgattatgatggcggc
tcttcaagaaaacggaaaaaagaccgtgattttggacggaaagctgacctgactaagcct
gtcaattttgtctccacaggtaaagtcatgcctaatcaagaaattgatattagtaataac
aataatgatagtttaaaagaagaaactgttgatgatgatatgtttgccgatgataatgac
agggtagggttaggggctggtttggggtcagggctaggatttagtgcagggttagggttt
actaataatggggttaaaaaaactaaaggaagcatggattctgatggtggtggtggtgag
gatgaggatgaaaagaactttttgccgaccgaatttgggaggaggataagagagggggcg
caaaggagagagcgagagagattggagaagaaagaaaagggaggattaggaggagggaga
agggaagtgaaaggtggggatgttggggagtttgagaagcatacaaaaggaattgggatg
aaattgttggagaaaatggggtataaaggaggtgggttggggaaaaatgagcaaggaatt
ttagcgccaattgaagcgaagctgaggccaaagaatatgggtatggggttcaatgattat
aaagaaacttcggctaaattgccacaattggaggaggagaagaagagtgtgagtataagt
cagagccaaagtttgagtcaggggagagcaaaggagaggttgtggatgaaggggaggaag
aagaagaaagaggagtatataacagcagaggagttgttggcaaagaaggaagaagagggt
tttcatgttgtacaaaaggtgcttgatatgcgggggccacaagtgagggttctgacaaat
ttggataacttgaatgctgaagagaaagctagagaaaatgatatcccgatgccagaactt
cagcataatttgaggttgattgtggacatggtggaagttgacattcagaagattgataga
gacttaagaaatgagagggagaccgcaattagtctgaagaatgagaaggagaagttggaa
atggaagctgctcgccagaagaaacaattggataacatggaggaaatcatgaatatgctg
agctatattgaggaacagaattcttctggaaccttgacgttagatttgttagcaaagtgt
tttactgacttaagaaggaaatttgcagacgattacaagctttgcaacttgtcttgcatt
gcttgttcatttgctttacctttgtttattagggtatttcagggatgggatcctctcaga
aatccattgcatggtttggaactcatagagttatggaaaaatgttttgcaaggggatgaa
agtaatgatatatgggatgtaggtacaccttacactcagttagtatcagaagtagttttt
cctgctgtaagaatatctggcattaatacatgggagcctagggatcctgaacctatgctc
agatttttggagtcatgggagaagtcattgcctgcatcagttgtccagagcatatcagat
aatgtggtcttgccaaagttgtctagtgcagtggactcatggaaccctcagctggagact
gtcccaatccatgtttgggtgcatccatggctgccactgctgggacagaaattggagtat
ttatatgagaaaatacggatgaagttgtccatggttcttgatcgatgggaaccaaatgat
acatctgcatacaccatcttgtctccttggaaaactgtttttgattcagctagttgggaa
cgtctaatgtgtagatttataattcctaaattggaggttgcactgcaagggttcgaaata
aacccagttgatcagaagcttgatcaattctattgggtcatgtcatgggcttctgcaatt
cctatacatttaatggttgatatgatggagaggtttttctttgaaaagtggctgctagtt
ttgtatcattggctgtgctcaagtccaaacttacaggaggttcatcaatggtatataggt
tggaagggactctttccaccagagctgcaggcacatgaacatattcggtatcaatttact
cgcggccttcaaatgattgataaggccattgaaggtatggaagtggttcaacctggtttg
agggacaaccttacttatcttagggcacaagagcaaaggcagtttgaggctcagcagaga
gctgcagtacatgcaaagcagcaatctgcgatgggtatggcaagcacatcccaggcagac
agtatgggtgctggccctcagatgactttgaaagaagttgttgaggcccatgcacaacaa
catggattgctattcaaacctaaatatggcaggacattcaatgggcatcaaatttatggc
tatggtaacataagcatttatgtggactctgtacatttacggttgtatgcccagaaggat
gaagattggttcctgacaagtcttgataagttgcttgagatgcataacaaatcttttaca
aagagacggtga
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