Ricinus communis (castor bean): 8284495
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Entry
8284495 CDS
T01087
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8284495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8284495
03009 Ribosome biogenesis [BR:
rcu03009
]
8284495
04131 Membrane trafficking [BR:
rcu04131
]
8284495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8284495
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
8284495
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
8284495
Membrane trafficking [BR:
rcu04131
]
SNARE
SNARE associated proteins
Others
8284495
Autophagy
Aggrephagy
Other aggrephagy associated proteins
8284495
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8284495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
nSTAND_NTPase5
AAA_18
ABC_tran
Viral_helicase1
NB-ARC
NACHT
AAA_7
Vps4_C
TsaE
IstB_IS21
DUF815
AAA_lid_PRS2_C
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
8284495
NCBI-ProteinID:
XP_002519502
UniProt:
A0ACK6B7T4
LinkDB
All DBs
Position
10:complement(14825967..14830922)
Genome browser
AA seq
805 aa
AA seq
DB search
MSNQPESSDSKGTKRDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPETMEKLQLFRGD
TILIKGKKRKDTICIALADGSCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDSA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRQRDN
PEAMEEDVEDDVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
STGGAAGADPFAASAGGADDDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaacccgaatcatccgactcgaagggaacaaaaagggattttagtactgcg
attttagagcgaaagaagtcaccaaatcggcttgttgttgatgaagctattaatgatgat
aactctgttgtttctcttcatcctgaaactatggagaagctccagctctttcgtggtgac
acgatcttgattaagggaaagaaaaggaaggatactatctgcattgcccttgccgatggc
tcttgtgacgagccaaagatcaggatgaacaaggttgtgaggtcaaacctgagagttagg
cttggagatgttgtctctgtgcaccaatgtcctgatgtcaaatatggaaagcgtgtgcac
atactccctattgatgacacaattgaaggagtcactggaaatctgttcgatgcatacttg
aaaccttatttcctcgaggcgtatcgcccagtcaggaagggtgatctcttcctcgtgagg
ggaggaatgagaagcgtggaattcaaggttattgagaccgaccctgcagagtactgtgtg
gtcgcccctgacactgagattttctgtgagggtgagcctgtgaggagagaagatgagaat
agattagatgaagttggctatgatgatgttggtggtgttagaaaacagatggctcagatt
agggagctggtggagcttccactgaggcatccacagctattcaaatcaattggtgttaag
ccaccaaaaggaattttgctttatggacctcctggttctgggaagactcttattgcccgg
gctgttgccaatgaaactggtgctttcttcttctgtattaatggacctgagatcatgtca
aaattggctggggagagtgaaagcaatcttagaaaagcttttgaggaagcagagaaaaat
gcaccatccatcatttttattgatgagattgattcaattgctcccaagagagagaagaca
catggagaggtggagaggaggatagtctcccagctattaacacttatggatggacttaaa
tcccgtgcgcatgttattgtcattggggccacaaatcgccccaacagcattgactctgct
ttgagaaggtttggcagatttgatagggaaattgacattggtgtaccagacgaagttggg
cgacttgaagttctcagaatccatacgaagaacatgaagcttgcagaagatgttgatttg
gaaagaatttccaaagacacacatggttatgttggtgctgatttggcagctctgtgcact
gaggctgcacttcaatgcatcagggagaagatggatgtgatcgacttagaagatgaatca
atagatgctgagatacttaactctatggcagtgagtaatgaacacttccaaactgcactt
ggaacaagtaacccatctgctctgcgcgaaacagttgttgaagtgcccaatgtgagttgg
gaagatattggaggccttgagaatgttaagagggagcttcaagagactgttcaatatcca
gtggagcaccctgagaaattcgagaaattcggaatgtcaccctctaagggagttcttttc
tatggccctcctggatgtgggaaaactcttctggctaaagctattgccaatgagtgccag
gcaaatttcatcagtgtgaagggtcctgaattgcttacaatgtggttcggtgagagtgaa
gccaacgtccgagaaatttttgacaaggctcgacaatctgctccttgtgttctcttcttt
gatgaacttgactcaattgccactcagagagggagcagtgtaggagacgctgggggtgct
gctgatagggttttgaaccagcttttgacagaaatggacggcatgtctgcaaaaaaaact
gttttcataatcggtgccactaatagacctgatatcatagatcctgcactcctgcgtcct
ggccgtctggatcagttgatttacatccctcttcctgatgaggattcacgccaccaaatt
ttcaaggcttgcttgaggaaatcaccagtctccaaagatgttgacctcagagcacttgcc
aagtacactcagggctttagtggtgctgatatcactgaaatatgccagcgtgcttgcaag
tatgctataagagagaacattgaaaaggacattgagagggagaggaggcaaagggataat
ccagaagctatggaagaagatgttgaggatgatgtggcagagatcaaggcagcacatttc
gaggagtcgatgaagtatgcccgcaggagtgtgagtgatgcggacattcgcaaataccag
gcatttgctcagactttgcaacaatcaagaggctttggatcagaattcaggttttctgaa
tctactggcggagctgctggagctgatccttttgcagcttcggcaggtggggctgatgac
gacgatctatacaattag
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