KEGG   Ricinus communis (castor bean): 8284495
Entry
8284495           CDS       T01087                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8284495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8284495
   03009 Ribosome biogenesis [BR:rcu03009]
    8284495
   04131 Membrane trafficking [BR:rcu04131]
    8284495
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcu04147]
    8284495
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     8284495
Ribosome biogenesis [BR:rcu03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    8284495
Membrane trafficking [BR:rcu04131]
 SNARE
  SNARE associated proteins
   Others
    8284495
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    8284495
Exosome [BR:rcu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8284495
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_5 AAA_33 AAA_22 AAA_14 TIP49 NPHP3_N RNA_helicase nSTAND3 AAA_17 AAA_28 Mg_chelatase ATPase_2 Parvo_NS1 AAA_18 IstB_IS21 ABC_tran Viral_helicase1 NACHT AAA_7 Vps4_C NB-ARC AAA_24 TsaE AAA_lid_PRS2_C DUF815 Zeta_toxin Sigma54_activat Sigma54_activ_2 Zot
Other DBs
NCBI-GeneID: 8284495
NCBI-ProteinID: XP_002519502
UniProt: B9S0I3
LinkDB
Position
10:complement(14825967..14830922)
AA seq 805 aa
MSNQPESSDSKGTKRDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPETMEKLQLFRGD
TILIKGKKRKDTICIALADGSCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDSA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRQRDN
PEAMEEDVEDDVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
STGGAAGADPFAASAGGADDDDLYN
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtctaaccaacccgaatcatccgactcgaagggaacaaaaagggattttagtactgcg
attttagagcgaaagaagtcaccaaatcggcttgttgttgatgaagctattaatgatgat
aactctgttgtttctcttcatcctgaaactatggagaagctccagctctttcgtggtgac
acgatcttgattaagggaaagaaaaggaaggatactatctgcattgcccttgccgatggc
tcttgtgacgagccaaagatcaggatgaacaaggttgtgaggtcaaacctgagagttagg
cttggagatgttgtctctgtgcaccaatgtcctgatgtcaaatatggaaagcgtgtgcac
atactccctattgatgacacaattgaaggagtcactggaaatctgttcgatgcatacttg
aaaccttatttcctcgaggcgtatcgcccagtcaggaagggtgatctcttcctcgtgagg
ggaggaatgagaagcgtggaattcaaggttattgagaccgaccctgcagagtactgtgtg
gtcgcccctgacactgagattttctgtgagggtgagcctgtgaggagagaagatgagaat
agattagatgaagttggctatgatgatgttggtggtgttagaaaacagatggctcagatt
agggagctggtggagcttccactgaggcatccacagctattcaaatcaattggtgttaag
ccaccaaaaggaattttgctttatggacctcctggttctgggaagactcttattgcccgg
gctgttgccaatgaaactggtgctttcttcttctgtattaatggacctgagatcatgtca
aaattggctggggagagtgaaagcaatcttagaaaagcttttgaggaagcagagaaaaat
gcaccatccatcatttttattgatgagattgattcaattgctcccaagagagagaagaca
catggagaggtggagaggaggatagtctcccagctattaacacttatggatggacttaaa
tcccgtgcgcatgttattgtcattggggccacaaatcgccccaacagcattgactctgct
ttgagaaggtttggcagatttgatagggaaattgacattggtgtaccagacgaagttggg
cgacttgaagttctcagaatccatacgaagaacatgaagcttgcagaagatgttgatttg
gaaagaatttccaaagacacacatggttatgttggtgctgatttggcagctctgtgcact
gaggctgcacttcaatgcatcagggagaagatggatgtgatcgacttagaagatgaatca
atagatgctgagatacttaactctatggcagtgagtaatgaacacttccaaactgcactt
ggaacaagtaacccatctgctctgcgcgaaacagttgttgaagtgcccaatgtgagttgg
gaagatattggaggccttgagaatgttaagagggagcttcaagagactgttcaatatcca
gtggagcaccctgagaaattcgagaaattcggaatgtcaccctctaagggagttcttttc
tatggccctcctggatgtgggaaaactcttctggctaaagctattgccaatgagtgccag
gcaaatttcatcagtgtgaagggtcctgaattgcttacaatgtggttcggtgagagtgaa
gccaacgtccgagaaatttttgacaaggctcgacaatctgctccttgtgttctcttcttt
gatgaacttgactcaattgccactcagagagggagcagtgtaggagacgctgggggtgct
gctgatagggttttgaaccagcttttgacagaaatggacggcatgtctgcaaaaaaaact
gttttcataatcggtgccactaatagacctgatatcatagatcctgcactcctgcgtcct
ggccgtctggatcagttgatttacatccctcttcctgatgaggattcacgccaccaaatt
ttcaaggcttgcttgaggaaatcaccagtctccaaagatgttgacctcagagcacttgcc
aagtacactcagggctttagtggtgctgatatcactgaaatatgccagcgtgcttgcaag
tatgctataagagagaacattgaaaaggacattgagagggagaggaggcaaagggataat
ccagaagctatggaagaagatgttgaggatgatgtggcagagatcaaggcagcacatttc
gaggagtcgatgaagtatgcccgcaggagtgtgagtgatgcggacattcgcaaataccag
gcatttgctcagactttgcaacaatcaagaggctttggatcagaattcaggttttctgaa
tctactggcggagctgctggagctgatccttttgcagcttcggcaggtggggctgatgac
gacgatctatacaattag

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