Ricinus communis (castor bean): 8284569
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Entry
8284569 CDS
T01087
Name
(RefSeq) nuclear pore complex protein NUP93A isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8284569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8284569
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8284569
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nic96
Integrase_H2C2
zf-H2C2
P68HR
Motif
Other DBs
NCBI-GeneID:
8284569
NCBI-ProteinID:
XP_048226906
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Position
2:29748275..29757704
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AA seq
865 aa
AA seq
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MAGTSEQDMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKSLRTDAPT
QSIAATRLLAREGINAEQLARDLKSFELKTVFEDVFPAEATTVEEYLQQVHEMAMVSAIQ
EAQKDSLRSFNDYMLKVLEEDWQKEKRDFLQSLSRISALPRTNAIETSSGGTRSGQIASV
ASSPQASSGPIGMELVPLANMPILEKKASAYAEVVKNLNNAREHGLQFKPATAFKNAYDS
LGHEASGGKSVNMQKMWHLIQTLMGENSTFQRNLSRKMSLVIGARRHLEWGHEKYIMDTI
QSHPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTG
YYDEARNIALSSRASQQFAPLLTEWINTGGIVPPEIAAAASEECEKMLRMVDRVGRGAYD
KKKLLLYALVSGSRRQIDRLLRDLPTLFNTIEDFLWFKLSAVRDFHGGTSAVVLNEGSAP
YSLEDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLKAVLHLSKEVADEGYDIDAVH
MAIVLADHGVLSEVAGAGQKLGIMDAYAEVSSIIRQYGSTYLRRGNLLGALEYYAQAAAA
VGGGEVSWTGRGNVDQQRQRSLMLKQLLTELLLRDGGIYLLLGPRGAGEEGELVRFLNDF
RVRQQFLLEAARQCQEAGLYDKSIEIQKRVGAFSMALDTINKCLSEAICALSRGRLDGES
RTAGLIHSGNEILETYKYYPDVSFQERDHVLEQETVLRQLEAILSVHKLARLGHYLDALR
EVAKLPFLPFDPRAPDATANLFQNLSSHVQVCVPDLLKAALTCLDNVTDSDGSLRAMRAK
IAQFLANNMSRNWPRDLYEKVARSL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcggggacaagtgaacaagacatgagtggttggactgatcttctacactcatccact
aagcttctcgaacaagctgctccttctgctcagttccctcctctccagaggaatttagat
cagttagaagcattatctaagaaactcaaggctaaatccttgagaactgacgctcctact
caatctatcgctgccacaaggcttcttgctcgtgaaggaattaacgcggagcagcttgct
cgagaccttaagtctttcgaattgaagacagtatttgaggatgtcttccctgctgaggct
acaactgttgaagaatatttgcaacaggttcatgaaatggcaatggtgtcagccatacag
gaagctcagaaggacagcctgagaagctttaatgattacatgctgaaagttttagaggaa
gattggcaaaaggaaaaacgggactttcttcagagcttgagccggatttcggcattacct
aggactaacgcgattgaaacaagtagtggaggtactcgttcaggtcaaatagcatctgtt
gcttccagccctcaggcttcttctggcccaattggcatggagcttgtacctttagccaac
atgccaatcttggagaaaaaagcttcagcttatgctgaagttgtgaagaatttgaataat
gcaagagagcatggcttgcaatttaagcctgcaacagccttcaagaatgcttatgatagt
ttgggtcatgaagcttctggtggaaaatcagttaacatgcagaagatgtggcatcttatt
cagacattgatgggtgagaattcaacctttcaacggaatctttcgagaaaaatgtcatta
gtgattggagcaaggcggcatttagaatggggacatgaaaagtatattatggacacaata
caaagtcatccagcacaggctgccctcggtggtgctgttggaaatttacaaagagttcgt
gcttttcttcggattcgcttaagggattatggtgttctagattttgatgcaggagatgca
cgtaggcagccaccagttgataccacttggcagcagatttatttttgcttgagaactggg
tattatgatgaagcaagaaacattgccctgtcatcccgtgcttctcagcaatttgctcct
ctgcttacagagtggattaacactggaggaatagtgcctccagaaattgcagctgctgct
tctgaagaatgtgaaaaaatgttgagaatggttgatcgggtgggtcgaggtgcatatgac
aaaaaaaagctgttactatatgctttagtatctggttctaggaggcaaattgaccgactt
ctgagagatctacctacactattcaatactatagaggactttttgtggttcaagttatca
gctgtacgggacttccatggtggtacctcagctgtggtcctaaatgaaggttcagcgccg
tatagtctggaagatttacaggcttacttaaataaatttgagccatcatactataccaaa
aatgggaaggaccctctggtttacccttatgtattgcttttgagcattcagttgctaaaa
gctgtcttgcatttgtccaaggaagttgcagatgaaggatatgatattgatgctgtccac
atggcaattgtgctagcagaccacggagttctttctgaagttgcaggagctggacaaaaa
cttggtatcatggatgcttatgcagaagtctctagtataattaggcaatatggttctaca
tatttacgtcgtggcaatctcttgggggcattggaatattatgcacaagctgctgctgca
gtaggtggtggagaggtgtcatggactgggagaggcaatgtagatcagcagagacagaga
agtttgatgctgaagcaactccttactgagctactattacgggacggtggtatttatctc
ttacttggtccacggggtgctggagaagaaggtgaattagtgcgatttttaaatgacttt
agagtgagacaacaatttctgcttgaagctgcccggcaatgtcaggaagccggactctat
gacaagtccatagaaattcagaagagggttggagcattttccatggctttagatacaatt
aataagtgcttgtctgaagcaatctgtgccctgtcacgtggtagactggatggcgagagc
cggactgcaggtctcattcattctggcaatgagattctggagacatacaagtattatcct
gatgttagttttcaagagagagatcatgttttagagcaagaaactgtgttgagacagctt
gaggcgattttatctgttcacaagttagcaagattgggtcattatcttgatgctctaagg
gaggttgctaagcttccctttcttccatttgatccacgagctccagatgccactgcaaat
ttatttcagaatttgtcttctcatgtccaagtttgtgtacctgaccttcttaaggccgct
cttacatgtcttgacaatgtaacagattctgatggatcacttcgtgctatgagggcaaag
attgcacagtttcttgcgaacaatatgagtcggaactggcctcgcgatttgtacgaaaaa
gttgctcgaagtttatga
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