Ricinus communis (castor bean): 8284763
Help
Entry
8284763 CDS
T01087
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8284763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8284763
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
8284763
INO80 complex (yeast)
8284763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
8284763
NCBI-ProteinID:
XP_048235893
LinkDB
All DBs
Position
10:complement(20254723..20268379)
Genome browser
AA seq
1531 aa
AA seq
DB search
MEHRRQANDSLSYSNLFNLESLINFKVPQPDDDFDYYTNSSQDESRGSQGGVMANYGNGN
IQDKDLSLAKRKKRSNNSDGEEGDRYNSTRITEERYRSMLGEHIQKYKRRFKDSSSGPAP
APSRMGFPVPKSSLGSSKTRKLGSEQRGGLYDVETTSEWLNDVTPIKRGDYVESDYTPKI
SYEPAYLDIGEGITYRIPPSYDKLASSLNLPSFSDIRVEEFYLKGTLDLGSLAEMMTNDR
RLGPRSRAGMGDPRPQYESLQGRLKELAASNSAQKFSLKISEAALNSSIPEGAAGNTPRS
ILSEGGVLQVYYVKVLEKGEMYEIIERSLPKKPKLKKDPAVIEREEMEKIGKVWVNIVRR
DIPKHHRIFTTFHRKQLIDAKRFSENCQREVKLKVSRSLKLMRGAAIRTRKLARDMLLFW
KRVDKEMAEVRKKEEREVAESLKREQELREAKRQQQRLNFLLQQTELYNHFMQNKPQSQP
SEALPGEDENLDDPEMRMRSSGTGPGDEEDPEEVELRKEALKAAQDAVSKQKKLTSAFDT
ECSKLRQAADIDASAAGSSDIDLHNPSTMPVTSTVKTPELFNGSLKEYQLKGLQWLVNCY
EQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDL
KTLPYWGGIHERTILRKNINAKRLYRREAAFHILITSYQLLVSDEKYFRRVKWQYMVLDE
AQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWF
SKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVITELTRKTEVTVHCKLSSRQQA
FYQAIKNKISLAELFDGNRGHLNEKKLMSLMNIVIQLRKVCNHPELFERNEGSTYLYFGD
IPNSLLPPPFGELEDIHYSGARNPITYQIPKLVHKETSSEALCSAVGHGVCGERFLELFN
IFSPANIYQSLFRQEDTSNSLLVKSGTFGFTHLMDLSPTEVTFLATGSLMERLLFSILRW
NRQFLDGILNLLVEDMDDDSHYNDFEREKVRVVTRMLLMPSRSETNVLRRRFATGPVETP
FEALVTSHQDRILSNIKLLHSVYTFIPRARAPPIFAQCSDRNFAYKMIEELHQPWVKRLL
LGFARTSEFNGPRKPDGPHPLVQEIDCELPVSQPALQLTYNIFGSCPPMQSFDPAKLLTD
SGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM
VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV
TVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQLEQKLR
EIPQQAKDRQKKKPTKAIRLDAEGDATLEDLNEAEAQGTGNEHSQDTEKAKSSNKKRKSA
SDKQTPPKPRNSQKMNESNSTLADYELDDSLPNTDQQSQRSKRPKRTKKSVNENLEPAFT
ATPMTDPTQTQYAPTNAFGSTHTNTLNLTKI
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggagcacaggagacaagccaatgattcactctcttattcaaatctcttcaatctcgag
tctttgatcaacttcaaagttccacaaccggatgatgattttgattattatacgaatagt
agtcaggatgagagcagaggtagccaaggtggtgtaatggcaaactatggtaatgggaat
attcaagataaggacttgagtttagctaagagaaagaagcggtctaataacagtgacgga
gaggagggagacagatacaacagtacacgaatcacagaggagcgttatcgttcaatgcta
ggggagcacattcagaagtacaagaggaggtttaaggattcctcgtcaggtcctgcacct
gctccatcacgtatgggttttcctgttccaaagagtagtttaggaagttcaaagacgaga
aagctggggagtgaacagcgaggagggttgtatgacgtagaaaccacatctgaatggctt
aatgatgttactcccataaaacgtggagactatgttgaatcagattatacacccaaaata
tcctatgaacctgcttatttggatattggagagggtatcacttataggatacctccctct
tatgataagttggcatcatctttgaacttgccaagcttctccgacatcagggttgaggaa
ttctacttgaagggcactctggatttaggatcattagctgaaatgatgaccaatgataga
aggcttggacctagaagtcgagcagggatgggagatccccggccccagtatgagtcactt
cagggaagattgaaggaattggcagcttctaactcagcccagaagttcagtctaaagata
tctgaagctgctttgaattcctccatcccagaaggggcggctggaaatacaccacggtcg
attttgtccgagggtggtgtattgcaggtttactatgtgaaggttctggagaaaggagag
atgtatgagattatagagcggagtctaccaaagaagccaaagttgaagaaagaccctgct
gtcattgagagggaggaaatggaaaagattggcaaggtttgggtgaacattgtaagaaga
gacatacctaagcatcatagaattttcactactttccataggaagcaattaattgatgca
aagaggttctcagagaactgccaaagagaggtaaaattgaaggtcagtagatcgctcaaa
ctcatgaggggtgctgcaattcgcactaggaagttggctagagatatgctgctgttttgg
aagcgggtggacaaggagatggctgaagtgaggaaaaaagaggagagagaagttgcagaa
tctttgaagcgtgaacaggagcttcgagaagcaaaaagacagcagcaaaggctcaatttc
ttgttacaacaaactgaactttataatcacttcatgcaaaataagccacaatcacagccc
tctgaagctttgcctggggaagatgagaacttggatgacccagaaatgcgtatgagatct
tctggaactgggcctggtgatgaagaagaccctgaggaggtggaattgagaaaagaggct
ctgaaagctgctcaagatgcagtgtctaagcagaagaagttaacaagtgcatttgatact
gaatgctcaaagctgcgtcaagctgctgatattgatgcctcagctgcaggatctagtgac
atagatctccataatccctccaccatgcctgttacatcaactgttaagacccctgagctg
tttaacggtagccttaaagaatatcagttgaagggtcttcagtggcttgttaactgttat
gagcagggtttgaatggtatacttgctgatgaaatgggccttggaaagactattcaagct
atggcgttcttggctcatttagctgaggagaaaaatatatgggggccttttctggttgtt
gcacctgcttctgtcttgaataactgggctgatgaaattagccgtttctgccctgacttg
aaaacccttccatattggggtggcattcatgagcgaacaatattgaggaaaaacatcaat
gctaagcgtctttatcgaagggaggctgcatttcacattctaattaccagctatcaactg
ctagtatctgacgagaagtatttccggcgtgtgaaatggcaatatatggtactagacgaa
gcccaggctatcaagagttccagcagtataagatggaagacgctgctcagtttcaattgt
cgtaaccgcttgcttctcaccggtacgcctatccagaataatatggcagaactgtgggcc
cttctgcattttatcatgcctacattatttgacagccatgaacagttcaatgaatggttt
tccaaaggaattgagaatcatgcagagcatgggggtactttgaatgagcaccagctcaat
cgattgcatgcaattttaaagcctttcatgcttcgacgagttaaaaaggatgtgattact
gagctgaccagaaaaacagaagttacagtacactgcaagttaagctctcggcagcaagct
ttttatcaagctattaagaataaaatatcccttgctgagttgtttgatggcaatcgcgga
catttgaatgagaagaaacttatgagtttaatgaatatagtcattcagttgagaaaggta
tgcaaccatccagagttgtttgaaaggaacgagggaagcacatatctctattttggagat
atcccaaattcccttcttccccctccctttggcgaattggaggacatacactattcagga
gctagaaatcctattacataccagattccaaaactagtgcacaaagagacaagctctgaa
gcactttgttccgcagttggacatggtgtctgtggggaacgatttctggaactttttaat
atattctccccagcaaatatttatcagtctctattcagacaagaggatacctcaaatagt
ttgcttgtgaagagtgggacatttggttttacacatttgatggacttgtcacccacagag
gttacatttctggcaactggttcacttatggagaggctattgttttctatactgaggtgg
aaccgccaatttttggatggaatattgaacttgcttgtggaagatatggatgatgattcc
cattataatgactttgagagggaaaaagtaagagttgttactcggatgttattgatgccg
tcaagatccgaaacaaatgtgttgaggaggagatttgctacaggacctgtcgaaactcca
tttgaggctttagtcacctctcatcaggacaggatactgtccaacattaagcttcttcat
tcagtatatacattcatcccccgagccagagcaccaccgatttttgcccaatgctcggat
agaaattttgcttacaaaatgattgaagagttgcaccaaccctgggtaaagaggttgtta
cttgggtttgcccgtacatctgaattcaatggacctagaaagcctgacggccctcatccc
ttagtccaagagatcgactgtgaactacctgtttcacaacctgctcttcagctgacatac
aatatatttggttcttgtccccctatgcaaagctttgacccggcaaagttgcttacagac
tctgggaagcttcagactcttgatatattgttgaaacgtttgcgagctgagaaccaccgg
gtgctattgtttgcacaaatgacaaaaatgctgaatattcttgaggactacatgaattac
aggaagtataggtaccttagacttgatggatcctccacaattatggaccgaagggacatg
gtgagagatttccagcacaggagtgatatttttgtgttcttgctaagcaccagagctggt
ggcctgggtatcaatttgactgcagctgatactgtcattttttatgagagtgattggaat
ccaacattagacttacaggctatggatagagctcatcggttggggcagacaaaggatgtt
actgtttatcgactcatttgtaaagaaactgttgaggagaagattctgcaaagagcgagt
cagaagaacactgtccagcagcttgtcatgacaggtggccatgttcagggtgatctgttg
gcccctgaggatgttgtgtcactacttctggatgatgctcagttggagcagaaattaaga
gaaattccacaacaggccaaagatagacaaaagaaaaaaccaacaaaggccatacggctt
gatgcagaaggtgatgcaactcttgaagatttaaatgaagctgaggctcagggcaccggg
aatgaacattctcaggatacggagaaagcaaaatccagtaacaaaaagaggaaatctgct
tctgataagcaaactccaccaaagccaagaaattcacaaaagatgaatgaatcaaattcc
acgttggcggactatgaattggatgattctttaccaaatacagaccaacaatcacaaaga
tctaagaggccaaagaggacaaagaagagtgtaaatgagaatcttgaaccagcattcact
gccacacccatgactgatccaacacagactcaatatgcacctacaaatgcgtttggttct
acgcatacaaacacacttaacttaacaaagatatga
DBGET
integrated database retrieval system
