Ricinus communis (castor bean): 8285010
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Entry
8285010 CDS
T01087
Name
(RefSeq) long chain base biosynthesis protein 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00600
Sphingolipid metabolism
rcu01100
Metabolic pathways
Module
rcu_M00094
Ceramide biosynthesis
rcu_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
8285010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcu01007
]
8285010
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
8285010
Amino acid related enzymes [BR:
rcu01007
]
Aminotransferase (transaminase)
Class II
8285010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
CBM32
Motif
Other DBs
NCBI-GeneID:
8285010
NCBI-ProteinID:
XP_002518026
UniProt:
B9RWA7
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Position
7:482503..490125
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AA seq
482 aa
AA seq
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MGSVFLSQFVNTTIDWVKVALDAPSARAVVFGVHIGGHLFVEGLLLVVILFLLSQKSYKP
PKRPLTNKEIDELCEDWVPEPLIPPITQEMQYEPAVLESAAGPHAIINSKEVVNFASANY
LGLIGHDKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGL
STMFSAIPCFCKKGDIIVVDEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNTLEKITAEK
KRAKQLRRYIVVEAVYQNSGQIAPLNEIIKLKEKYRFRVLLDESNSFGVLGRFGRGLTEY
YGVPVEKIDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITA
IDVLEDNPALITKLKENIAVLWKGLCNIQGLSIASNPESPIVFLRLENTTGSVKGDLKLL
EDIADRALKEDSVFVVVSKRSTLDKCRLPVAIKLYVSAAHSEADLIKACESLKRVSALVL
RN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggatcggttttcctttcacagtttgtgaatactactattgattgggtgaaggtagct
ttggatgctccctctgcccgagctgttgtttttggagttcatattggaggacatcttttc
gtcgagggtcttcttctagtggtcattctttttcttctttcccagaagagttacaagccc
cctaaacgccctttaactaacaaggaaattgatgagctatgtgaagactgggttccagaa
cccctcatccctcctattacacaagagatgcaatatgaaccagcagttttggaaagtgct
gcagggccacatgcaataattaatagcaaagaagttgtgaactttgcttcagctaactat
cttggactaatagggcatgacaaattacttgagtcatgcacctctgcattggaaaaatat
ggtgttggttcatgtggtccgcgtggattctatgggacaatcgatgtccaccttgattgt
gaggcaagaatagcaaagtttttgggaactcctgattcaattctatattcatatggactt
tctaccatgttcagtgcaattccatgtttttgcaagaaaggagatattatagtagttgat
gagggagtccattggggaatacaaaatggcctttatctttctagaagcaccattgtgtat
tttaagcataatgacatggaatctctacaaaatactttggagaaaataactgcagagaaa
aagcgtgctaagcagttgcggcgttacattgtagttgaagcagtgtaccagaattctggc
caaatagcaccactgaatgagatcatcaagttgaaggagaaatatcgcttccgtgttttg
ttggacgagagcaactcatttggtgtgcttgggaggtttggaagaggtctaactgaatat
tatggggttccggttgagaagatagatattataactgcagctatggggcatgcactagcc
actgaaggaggattctgcactggaagtgccagagtcattgatcaccaacgattgagcagc
tctgggtatgtgttttctgcttctttacctccatatctggcaagtgctgcaattactgct
attgacgtcctagaggataatcctgctctaataaccaagctgaaagaaaacattgctgta
ttgtggaaagggttgtgcaacatacagggcctttctatagcaagcaatccagaatcacct
attgtttttctcaggctggagaataccacaggttctgtaaaaggtgacctaaaactcctt
gaagatattgcagatcgtgcgttgaaggaagactctgtatttgtggtagtttcgaaaaga
tcaacactggataaatgccgtttgcctgtggcaattaaattgtatgtttcggctgcccat
agtgaagctgatttgattaaggcatgtgaatccttgaagagagtttcagcattggtgctg
aggaattga
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