Ricinus communis (castor bean): 8285054
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Entry
8285054 CDS
T01087
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8285054
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
8285054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_2
INTS1_R4
IMS_C
Motif
Other DBs
NCBI-GeneID:
8285054
NCBI-ProteinID:
XP_015579021
LinkDB
All DBs
Position
5:complement(9007809..9021825)
Genome browser
AA seq
1865 aa
AA seq
DB search
MSNLNSVNPIGWSSSGSSSTRRGIGLSNTIHSEVAPCLPLPSVPVFCGASDPNLKLFDDG
NIRGVWSLNRTEIISQASRIADLLRHTDVSYLNFRDETRLTSFGNVEPLELFDQVLQCNP
EAFEYVTPGKQSKNDISGSTTFESKPIGPSIPVLHQGQRDYYGTQTHQRNSIGPSIIVPN
QGQRHYDESQNHQRHSIPNDVPPSTRKSKVKRKGTDDIPPLIQPDPAELQDAIIGSFCEM
LEDFSGRAEIMSDERDEAEWLSMPASDLRMIVNEIMSIRAKKLLHLVPVDILVKLLQILD
HQIHRAEGLSVDEYEHQDSDAVSSVFCALESIHAALAVMAHNNMPKQLYKEENIERILEF
SKHQIMDVMAAYDSSFRALHKPNENGAPEGDEDEDLETDYGSASKRRRTQKSIKPKKSTL
NKVSGAVNTILQKLCTILGLMKDLLLIERLSDSCILQLVKTSFTTFLVDNVQLLQLKAIG
LISGIFYSYTQHRVYVVDEIVQLLWKLPFSKRALRAYHLPDEEQRQIQMITALLIQLVHS
SANLPEALREASSGNSILEMSLDSSYPTKCHEAVTETCCLFWTRVLQRFTTAKNQDASEL
KAMMENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNAGLKSKDVSARSMAIDLLGTIAA
RLKQDAVVCSRNKFWVLQELTSGDNADQSYPNDACCVCLDGKVEKTLFMCQGCHRLFHAD
CMGVRENEAPNRSWHCQICVCEKQLLVLQSYCNSQLKDEGKKNNNRLEKKYKACDPITKV
EIVQQLLLNYLQDSVSADDVHLFVRWFYLCLWYKDDPKSQQKLIYYLTRLKSNLVVRDSG
TTYSKLMKDSVKRITLALGQNSSFSRGFDKILHMLLASLRENSPVIRAKALRAVSIIVET
DPEVLRDKRVQLAVEGRFCDSAISVREAALELVGRHIASHPDVGLQYFEKVAERMKDTGV
SVRKRAIKIIRDMCTSNANFAQFTTACMEIISRITDDESSIQDIVCKTFYEFWFEEPSGS
QTQRYRDGSSVPLEVGKKTEQIVEMLRRMSSHQLLVTVIKRNLALDFLPQSAKAVGINPV
LLASVRNRCELMCKCLLERILQVEEMTSEEVEVRTLPYVLALHAFCVVDATLCAPASDPS
QFIVTLQPYLKTQVDNRAVAQLLESIIFIIDSVLPLIRKLPQSVVEELEQDLKHMIVRHS
FLTVVHACIKCLCSLGRVAGKGAGVVEYLIQVFFKRLDAQGTDNKQLVCRSLFCLGLLIR
YGDFLLSSSSNKNIDLVSNLALFKKYLRMEDFVVKVRSLQALGFVLIARPEYMLEKDIGK
ILEATLSSGSDVRLKIQALQNMYEYLLDAESQMGTDKASNNPNPYPVEGAHIVPVAAGAG
DTNICGGIVQLYWDNILGRCLDFSEQVRQTALKIVEVVLRQGLVHPITCVPYLIALETDP
LELNSKLAHHLLMNMNEKYPAFFESRLGDGLQLSFIFMQSISSASPENLNQKLQSRAAGN
IKGKPEGGSLTQARLGVSRIYKLIRGNRVSRNKFMSSIVRKFDNPSWTSSVVPFFMYCTE
VLAMLPFTLPDEPLYLIYSINRIIQVRAGALEANMKGLILHLSQRNSRKVAHENGLIQQE
PAQPVFHHMTTMDLNGMGQQESVARPVFHHVTTMDLSGIIQQEPVTQPDITPLTSFDLNG
IVQEEPHLVLKNDASRDLKMDKMSSGDSFSISKDDVEKIQVDCLSATALQLLLKLKRHLK
IMYSLNDARCQAFSPNEPPKSGEALSRQNIPFDISETSTSVPSTYQDLVQRYQEFKSALK
EDAVDYTTYTANIKRKRPTPRKTKHGRMNGVDDDDEDDDADWTGGVRRVSNSGRRSNNSR
ACRQR
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttaaattcagtaaatccgattgggtggagctcctccggttcaagctccacc
cgacgtggcataggattatcgaatacaatacactcagaggtagcgccgtgtttgcctttg
ccttcggttccggtgttctgtggtgcatcggatccaaacctgaagttgtttgatgatgga
aatattagaggtgtttggtctttgaatcgtactgaaattatttctcaagctagtcgtatc
gctgatctgcttcgtcatactgacgtgtcttatctgaacttccgagatgagacaaggctt
acttcatttggaaatgtggagcccctagaactttttgaccaggttctccaatgcaatcct
gaagcattcgagtatgtaactcctggtaaacaaagtaagaatgatatttctggaagtaca
acatttgaaagcaagcccattgggccaagtatacctgttttgcatcaaggtcaaagagat
tattatggaactcaaactcatcagcgcaactccattgggccaagtataattgttccaaat
caaggtcaaagacactatgatgagagtcaaaatcaccagcgccactccattcctaatgat
gttccaccatctacgagaaaatcaaaagtcaagaggaagggcactgatgacatcccacca
ttgattcagccagatcctgctgagcttcaagatgccatcattggaagcttctgtgaaatg
ctagaggacttctctggtagggctgaaattatgagtgatgaacgggatgaagcagagtgg
ttgtcaatgcctgctagtgatcttagaatgattgtaaatgaaataatgtccatacgtgca
aaaaagcttctacatttggttcctgtagatattcttgtaaaactcttacagattctagac
catcaaatacaccgagcggaaggtttgtctgttgatgaatatgagcatcaagattctgat
gcagtttcctcagtcttttgtgccctggaatccattcatgcagctctagctgtgatggcg
cataataacatgccaaagcaactatacaaagaagagaatattgaaagaattctggagttt
tctaagcatcagattatggatgttatggcagcttatgattcatcatttcgtgctttgcac
aagccaaatgaaaatggggcacctgaaggtgatgaagatgaagatcttgagactgactat
ggttccgcaagcaagagaaggcgcactcagaagagtataaaaccaaagaaatcgacatta
aacaaggtctccggtgctgtgaataccattctacaaaaactgtgcactattctcggctta
atgaaggatttgttgttaatagagaggttatcagatagttgcattttgcaactggtgaag
acgagctttacaacatttttggtggataatgtccaactgttgcaattgaaggcaattggt
ttaattagtgggatattctattcatatacacagcaccgtgtgtatgttgtagatgaaata
gttcaacttttatggaagttaccattttcaaagcgtgccctaagagcctaccatcttccc
gatgaggagcagaggcagattcagatgatcactgctttgttgatccaattggttcacagt
agtgcaaatcttcctgaagcattaagggaagcttctagtggtaattctatcttagaaatg
tcactggattctagttatccaaccaaatgccatgaggcagtcacagagacatgttgtctt
ttctggactcgagtccttcagcgctttacaactgcaaaaaatcaggatgcttctgaactg
aaagcgatgatggaaaatcttgttactgacctactgacaactttaaatttacctgaatat
ccggcatcagctcccatcctggaggttctctgtgtcttgctactccaaaatgctggactg
aaatccaaggatgtctctgcgcgttccatggccattgatcttcttggtacaattgcagca
agattgaagcaggatgctgtggtttgcagcaggaacaaattttgggtactacaggaattg
actagtggtgataatgctgatcagagttatccaaatgatgcatgttgtgtttgcctagat
ggaaaggttgagaaaacactgtttatgtgtcaaggttgtcacagattgttccatgctgat
tgcatgggagtaagagaaaatgaagctcctaatcgtagttggcactgtcagatttgcgtc
tgtgagaagcaacttcttgtgttacaatcatattgcaattcacagttgaaggatgagggg
aaaaagaacaataatcgactggaaaaaaaatataaagcttgtgatcccattacgaaagtt
gaaattgttcaacagctgctcttgaattatcttcaagattctgtatctgctgatgatgtg
catctctttgttcgatggttttatctgtgcttatggtacaaggatgatccaaaatcgcaa
cagaagctcatttactaccttacacgactcaaatcaaatcttgttgtgcgtgactctggg
actacatattcaaagctgatgaaggattcagtcaagagaattactttagcactgggacaa
aatagttctttctcaagagggtttgataagattcttcatatgctcctggcaagtttaagg
gagaactctcctgtaattagggccaaggctttacgtgcagtcagcattattgtagaaact
gatccggaggtattacgtgacaaacgtgtacaattggctgttgaaggaagattttgtgat
tctgcaatatctgtaagagaagcagcactggaacttgttggtaggcatattgcttcgcac
cctgatgtcgggctgcagtatttcgaaaaggtcgctgagaggatgaaagatacaggagtg
agtgttcgaaaacgagctatcaaaattatccgagatatgtgcacctcaaatgctaacttc
gctcaatttacaactgcttgcatggaaattatttctcgcattactgatgacgagtcaagt
attcaggatatcgtctgcaagacattttatgagttttggtttgaggaaccatctggttct
cagacacaacgttatagagatggtagttctgtgcccttggaggtgggtaagaagactgag
caaattgttgagatgttgaggaggatgtcaagccatcaactcctggttactgtcattaag
cgcaacttagcccttgattttttgccacaatcagctaaagctgttggaattaatcctgtg
ttacttgcatcagttcgtaaccgctgtgagttaatgtgcaagtgtttactagagaggata
ttgcaggtagaggaaatgaccagtgaggaagtggaggttcgcacactgccttacgtgttg
gcattacatgcattctgtgttgtggatgctacactttgtgcaccagcttctgacccttcc
cagtttatagtcactctacagccatatctcaagactcaggttgacaaccgagcagttgca
cagttactggagagtataatcttcataattgattctgttctacccttgatccgaaagttg
cctcaaagtgtagttgaagagcttgaacaagatttgaagcatatgattgttcggcattca
tttttgacagtagtccatgcttgcataaagtgtctctgctctttgggtagagtagcagga
aagggtgctggtgttgttgagtatcttattcaggtattcttcaaacgtttggatgctcag
ggaactgataacaagcagctagtatgccgctctctgttctgtctgggattacttattcgc
tacggggattttttgctgagctcctctagcaacaaaaatatcgatttagttagcaatctt
gccttgtttaagaagtatcttcgaatggaggattttgtagtaaaagtcagatcgttgcag
gctctaggttttgttctaattgctaggcctgaatatatgctggaaaaggacattgggaaa
atattagaggcgactttgtcttctggttctgatgttcgtcttaagatacaagcactgcaa
aatatgtatgaatatcttcttgatgccgaaagccaaatgggaacagataaagccagtaat
aatcccaatccttatccagtagaaggggcacatatcgtacctgttgctgcaggagcaggt
gatactaacatctgtggggggatagttcagttgtattgggataatattttgggaaggtgc
ttggatttcagtgaacaagttcgccagactgcacttaagattgtggaggtagtgctgcgt
caaggtttggtgcatcctattacttgtgttccataccttatagcacttgaaacagatcct
ttagaattaaactcaaagttggcgcatcatttattgatgaatatgaatgagaagtatcct
gctttttttgaaagccggttgggggatggccttcagctatcatttatattcatgcaatct
attagcagtgcatctcctgagaatttaaaccaaaaactgcagtctagagctgctggaaat
ataaagggaaaacctgaaggtggctctcttactcaggcaaggcttggagtttcccgaatc
tacaagcttatccgtggaaaccgtgtttcaaggaacaaatttatgtcctctattgttcga
aaatttgataatccaagctggaccagttcagttgtaccattttttatgtattgcacagaa
gtacttgctatgctgccatttactttacctgatgaacccctttacttgatttattctata
aatcggataatacaagttagggctggagcacttgaagcaaatatgaaaggcttaatttta
cacttgtcacaaagaaattctcggaaggtggcccatgaaaatgggttaatccagcaagag
ccagctcagcctgttttccatcatatgaccacaatggatttgaatgggatgggtcaacaa
gagtcagttgctcggcctgttttccatcatgtgaccacaatggatttgagtgggataatt
caacaagaaccagttactcagcctgatataactcctttgacatcatttgatttgaatggt
atagttcaggaagagccccatttggtcttgaaaaatgatgcttcaagagatctaaagatg
gataagatgagctctggtgattctttcagcatctcaaaagatgatgtggagaaaatccag
gttgactgtctttcagctactgcgttgcagcttcttttgaagctgaagaggcatctaaaa
atcatgtatagcctgaatgatgcccgttgccaggcgttttctccaaatgaacctccaaag
tctggagaagctctctcaaggcagaacattccctttgacattagtgaaacatctactagc
gtgccatccacatatcaagatctggtacagagatatcaggaattcaagagtgctttaaaa
gaagatgctgtagattacaccacttatactgcgaacatcaagaggaagcgtcctacccca
agaaagaccaaacatggacggatgaatggagttgatgatgatgatgaagacgatgatgca
gattggacaggaggggttcggagagtaagcaatagtgggaggagaagtaacaacagtaga
gcatgtaggcagcgatga
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