Ricinus communis (castor bean): 8285304
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Entry
8285304 CDS
T01087
Name
(RefSeq) UPF0400 protein C337.03 isoform X3
KO
K15559
regulator of Ty1 transposition protein 103
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8285304
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8285304
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
Allexi_40kDa
DUF4140
Mod_r
P4Ha_N
APG6_N
SesA
UPF0242
Med11
Motif
Other DBs
NCBI-GeneID:
8285304
NCBI-ProteinID:
XP_002512894
UniProt:
B9RH35
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Position
8:12458956..12466454
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AA seq
522 aa
AA seq
DB search
MGSSFNPQILMEKLAKLNHSQASIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPEALRDVIENGDEVGRNAALRLISIWEDRKVFGS
RGQILKEELVGKHSENSNRNGKHLGLKLKQPAGSTLDKIISGYQVLQGGHVDEEVTISKC
RSAISCLEKAEKEIGGSTDLGKFHGTPFVEELQGQHTILRDSIEQLTAIESSRASLVSHL
REALHEQESKLEQVRNQLQAAQSQSEHAGNVFQQFLHSNNVQLVAQESSKEANASSAPQS
FIPGNREQSAPAMYIRQVSFPEKTGHVQEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSL
ASEGVIGNPIKEPASEYPSEKRAKHENDQPYIPTQNPLQQPLPPFQHPESFQVATTSQQL
TSNDPPPPPSSPPPLPPLPPMPPYSISQYMQTTGSINAVPYSYSMSQQQPHSLPGYPGVG
TQMTGIASFTMPPTNSYQSYQGSDGTLYSQPSSMPMAPISRQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggcagttcatttaatcctcagattttaatggaaaagcttgccaagctcaaccattca
caggcaagcatagaaactttatcacactggtgtatttttcatatgaataaagcaaagcaa
gttgttgaaacatgggacagacagtttcattgttccccacgtgagcagagattggctttt
ctgtatcttgcaaatgacattttgcagaatagccgtcgaaagggttcagagtttgttggt
gaattttggaaggttcttccagaagctcttcgtgacgtaattgaaaatggggatgaggtc
ggaagaaatgccgcactaagactgattagcatatgggaagacagaaaagtttttggttcc
cgcgggcaaatactcaaggaagaacttgtgggcaagcactcagaaaacagtaatagaaat
gggaagcatttgggcctcaaactgaagcagcctgctggaagtacattggacaagataatt
tcaggttatcaagttcttcagggtggacatgtggatgaagaagttacaataagcaaatgt
aggagtgctattagctgtcttgaaaaagctgagaaggaaattggtggcagtactgatttg
ggaaaattccatggaactccatttgtggaagagctgcaagggcagcatactattttgaga
gacagcattgagcaattaacagcaattgaatcatcaagagcaagtcttgtttctcatctg
agagaggctctccacgagcaggaatccaagctggaacaagttcgtaatcaacttcaggca
gcacaatcccagtcagaacatgctggtaatgtcttccagcaatttctgcattccaataat
gtgcagttagtagctcaggaaagttcaaaggaagcgaatgcttccagtgcacctcagagc
ttcatacctggaaatagagaacaatcagctccagcaatgtacatacgccaggtttctttc
cctgaaaaaactggtcacgttcaggaagatccccggaagtctgcagctgctgcagtggca
gcaaaattaactgcatcaacatcctctgcccagatgctttcatatgtgctctcttctctt
gcatctgaaggtgtcattggtaatccgataaaagaaccagccagtgaatacccctccgaa
aagagggctaagcacgagaatgaccagccttacattccaacccagaatcccctgcagcaa
ccacttcctcctttccaacatcctgaatctttccaagttgcgacaactagtcagcaatta
acctcaaatgatccaccacctcctccatcttcgcctccaccgctgcccccactaccacct
atgccaccatattcaatttcccagtacatgcagactactggatcgataaatgctgtgcca
tacagctacagcatgtcccagcaacaaccgcattccttgcctggctatccaggagttggc
actcaaatgacaggtatcgcttccttcacaatgcctccaacaaattcgtaccaaagttat
caaggttcagatggtactttatacagccaaccgtcgtccatgccgatggcaccaatttcc
cggcaataa
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