Ricinus communis (castor bean): 8285351
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Entry
8285351 CDS
T01087
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00300
Lysine biosynthesis
rcu00470
D-Amino acid metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
rcu01230
Biosynthesis of amino acids
Module
rcu_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
8285351
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
8285351
Enzymes [BR:
rcu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
8285351
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
8285351
NCBI-ProteinID:
XP_002512941
UniProt:
B9RH82
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All DBs
Position
8:complement(12722703..12727863)
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AA seq
488 aa
AA seq
DB search
MAATTTHLAHPPTLSKNITFHHLKQNPFLKTSTLPVKFTRTSPKPLSLTLKAVLSQNPTL
TQETAQFKHCFTKSNDGFLYCENLKVQDVMESVEKRPFYLYSKPQITRNVEAYKSALEGL
NSIIGYAIKANNNFKILEHLRQLGCGAVLVSGNELRLALRAGYDPKKCIFNGNGKLLEDL
VLAAEEGVFVNVDSEFDLENIVAASRIAGEKINVLLRINPDVDPQVHPYVATGNKNSKFG
IRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEI
DYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLSRNLNLIIEPGRSLIANTCCLVNRV
TGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPAQPIVEVSTFDVVGPVCESADF
LGKGRELPTPSKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWIEEDGSVTKIRHGETFED
HMRFFEGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactacaacccatcttgctcatccacctactctctcgaagaacatcactttt
catcatttaaagcaaaacccatttcttaaaacttcgactttacccgtcaaattcactaga
acctctccaaagcccctctctcttactcttaaagcggttttatcacaaaacccaactcta
actcaagaaactgctcaattcaagcattgtttcactaaatcaaatgatgggtttctctac
tgtgagaatcttaaggttcaggatgtcatggagagtgttgagaaaagacctttttatttg
tatagtaagccacagattactagaaatgtggaggcttataagagtgctttagagggatta
aattctattattggttatgcaattaaggctaataataatttcaagattttggaacacctg
agacagttgggttgtggagctgtgcttgttagtggtaatgagcttaggttggctcttcgt
gctggatatgatcccaaaaagtgtatttttaatggaaacgggaagctcttggaggacctg
gttttagctgctgaggaaggtgtttttgttaatgtagatagtgaatttgatttagagaat
attgtagcagcttctagaattgctggagaaaagattaatgttttactccggatcaatcca
gatgtggatcctcaggtccatccttatgttgccactggtaacaagaactctaaatttggc
attagaaatgagaagctgcaatggtttctggatgctgttaaggcacaccctaatgagctt
aagcttgtgggagcccattgccatcttggttctaccattaccaaggtggacatattcaga
gatgctgcagttcttatggtcaactacattgatgaaattcgagctcaaggctttgaaatt
gattatctaaacattggcggtggtttgggtatagattattatcatgctggcgctgtcctt
cctactccgagagatctcatcgacactgttcgagaactggtgctctcacggaatctcaat
ctcatcattgaaccagggagatcattaattgcaaatacctgctgcctggtcaacagggtc
actggagtgaaaactaatgggactaaaaactttattgtgatcgatggtagcatggctgaa
cttattcgtccaagtctttatgatgcatatcaacacatagaacttgtttctcctgcacaa
cctattgtcgaagtatcaacttttgatgtggtgggtcctgtctgtgaatctgctgatttc
ttaggaaagggtagagaacttccaaccccatctaagggagctggtttggttgttcatgat
gctggagcttactgcatgagtatggcatcaacatacaatttgaagatgcgccctcctgag
tactggattgaagaagatggttctgtaaccaaaatacggcacggggagacattcgaagac
catatgcggttctttgagggtctttga
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