Ricinus communis (castor bean): 8285369
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Entry
8285369 CDS
T01087
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8285369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8285369
Membrane trafficking [BR:
rcu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
8285369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
DUF3492
Motif
Other DBs
NCBI-GeneID:
8285369
NCBI-ProteinID:
XP_002514399
LinkDB
All DBs
Position
4:complement(452438..467800)
Genome browser
AA seq
1732 aa
AA seq
DB search
MSSSQTLGGSSRSGKVLGPSLDKIVKNAAWRKHSHLVSACKSVLDSLQSLSDSDSVSGSN
ATVLVGIQSPSDSEFFLNPLILALESSYAKVVEPALECAFKLFSLGLLTGEIDSNNSSVL
FKIIDGVCKVCGIGEEAIELGVLRVLLAAVRSPCILIRGECLVNLVRTCYNVYLGGFNGT
NQICAKSVLAQIILIVFTRVEEDSLDVHVKTVNVNELLEFTDKTLNEGSSIHFCQNFLHE
VMGACEGVPNANILLHTSPSSNGGDANFSNGNENDKGGLGDGEANDVAESNGAGGAAVVA
WGSKVREDGFLLFRNLCKLSMKYSSQENPDDHILLRGKILSLELLKVVMDNGGPIWRNNE
RFLHAVKQYLCLSLLKNSALSVMAIFQLQCSIFMILLSKFRSGLKSEIGIFFPMLILRVL
ENVNQPSFLQKMIVLNFLEKIAQDPQIIVDVFVNYDCDLDAPNIYERIVNGLLKTALGPP
PGSTTTLSSAQDITFRHESVKCLVCIIKSMGAWMDQQLRVGESYAPKSSETDASTENLSN
PSGEDANSPDYDLHSEVNSEMSDAASLEQRRAYKIELQKGISLFNRKPAKGIEFLISTKK
IGGSPEEVVAFLKNTIGLNETIIGDYLGERDEFCLRVMHSYVDSFNFKAMDFGEAIRFFL
RGFRLPGEAQKIDRIMEKFAERYCKCNPNSFTSADTAYVLAYSVILLNTDAHNNMVKDKM
TKADFIRNNRGIDDGKDLPEEFLGTLYDNILKNEIKMNADSSAPQSKQANSLNKLLGLDG
ILNLVTGKQIEEKPLGANGLLIRRIQEQFKAKSGISESAYHIVTDAAILRFMVEACWGPM
LAAFSMTLDQSDDKLATSQCLQGFRYAVHVTAVMGMQTQRDAFVTSIAKFTYLHNAADMK
QKNVDAVKAIISIAIEDGNNLQEAWEHILTCLSRIEHLQLLGEGAPPDASFLTSSNVEAD
EKTWKSMGYPSLKKKGTLQNPAVMAVVRGGSYDSTTVGVNLPGPVTLEQINHFISNLNLL
DQIGNFELNHVFANSQRLNSEAIVAFVKALCKVSMSELQSPTDPRVFSLTKIVEIAHYNM
NRIRLVWSHIWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFL
RPFAIVMQKSSSAEIRELIVRCISQMVLSRVNNVKSGWKSVFLVFTAAAADERKNIVLLA
FETMEKIVREYFPYITETETTTFTDCVRCLTTFTNSRFNSDVSLNAIAFLRFCAVKLADG
GLVWIQKSGVDDLSIQSLNEMASDEQSLSDKDDHASYWIPLLTGLSQLTSDPRSAIRKSS
LEVLFNILNDHGHLFSRSFWNDIFNSVILPIFSNMYDKKDNLVKDGQSSPASASPQLEGS
GWDSETSAVATQCLVDLFVSYFNTVRSQLSSVVSILTGFIRSPIQGPASTGVAALLRLSG
ELGSRLSEEEWKKIFLALKEAAASTLPGFMKVLRSMDDIEMPDSSGSYADMDTTHHGFTN
DDREDDNLQTAAYVVSRVKSHIAVQLLILQVVTDLCKANLQFLSATNIGILLDIFSSIAS
HAHQLNSQTILQKKLEKACSILELSDPPMVHFENESYQNYLNFLHDLLVDNPSMSELMNI
ELQLVVVCEKILQIYLSCTGSQSMQQKPVSKLVVHWILPLGSAKKEELAARTTLLVSALC
ILSDLERDSFRRYASRFFPLLVDLVRSEHSSGEVQHLLSNIFQSCIGPVLMG
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatctcaaaccctaggaggttcatctcgttccggcaaagttttaggtccttca
ctcgacaaaatcgttaaaaatgcagcctggcgtaagcattcacacctcgtctccgcttgt
aaatctgttcttgacagcctccaatctctctccgattcggattccgtttccggttcaaat
gccactgttttagtgggtattcagtctccttccgactccgaattctttcttaacccttta
attctagccctggaatcttcttatgctaaagttgtggagcctgcgctcgaatgcgccttc
aagctcttctcgttaggccttcttacgggcgagatcgactcgaataattcttcagttctt
tttaagatcattgatggggtttgtaaggtctgtgggattggagaggaagctattgagctg
ggtgtgcttagggttttgcttgctgctgttcgatctccctgcattttgattcgcggagag
tgtttggttaatcttgtcagaacttgttataatgtgtatctcggtggatttaacggtact
aatcagatctgtgctaaatctgttcttgctcagattatacttattgtttttactcgtgtc
gaggaggattctttggatgttcatgttaaaactgtcaatgttaatgaattgttggagttt
actgataaaactttgaatgaaggaagttctattcatttttgtcagaattttcttcatgag
gttatgggtgcttgtgagggcgttccaaacgccaatattttattgcacactagtccgtct
tctaatggtggtgatgctaatttctcaaatggaaatgagaatgataaaggcggattgggt
gatggagaggcgaatgatgtagctgaatctaatggtgctggcggtgctgctgttgttgca
tgggggagtaaagttagggaggacggttttcttctttttagaaacctttgtaaattgtct
atgaaatactcctctcaggagaaccctgatgatcatattcttctcagaggtaaaatcttg
tctcttgagttgctcaaggtggtcatggacaatgggggtcccatttggcgcaataatgaa
aggtttctccatgctgttaagcaatatctctgcctgtcattgttaaagaacagtgcattg
tcagttatggctatttttcagcttcaatgctctatctttatgatcctgttatcaaaattc
agatcaggattaaagtcagaaattggcatattctttcctatgctcatcctcagggtgctt
gagaatgtgaaccagcctagtttcttacaaaaaatgatagtgctgaattttttggagaag
attgctcaggatccacagattatagttgatgtttttgtgaactatgactgtgacttagat
gcaccaaatatatatgagaggattgtgaatggccttcttaaaactgctctaggaccgcct
cctggttcaaccacaactttgtcctcggcccaggatattacttttcggcatgaatctgtg
aagtgtctggtctgtatcatcaaatcaatgggtgcttggatggatcaacaactgagagta
ggagagtcctatgcacctaagagctccgagactgatgcttcaacagagaatctctcaaac
ccaagtggagaagatgcaaatagtcctgactatgacttacattcagaagtgaactctgaa
atgtcagatgctgctagtcttgaacagcgccgggcttataaaatcgaactccagaaagga
atctctctgtttaataggaaacctgccaagggaattgagtttctgataagcaccaaaaaa
attggcggttctccagaagaagttgttgccttcctcaaaaacaccattggcctcaatgaa
accataattggtgactatttgggtgaaagagatgagttttgtttgagagttatgcattct
tatgttgattcattcaattttaaagcgatggattttggtgaagcaataaggtttttctta
cgaggcttcaggttacctggagaagctcagaagattgaccgaatcatggagaagtttgca
gagcgctattgtaaatgcaatccaaattcatttactagtgcagatacagcctatgtccta
gcatactctgtgatattgctcaacacagatgcccataacaacatggtgaaagataagatg
actaaggctgatttcatacgaaacaaccgtggaatagatgatgggaaggatttacctgaa
gagtttctgggcaccctctatgataatattttgaaaaatgaaattaaaatgaatgctgat
tcttctgctcctcaaagcaagcaggcaaacagcttaaataagctattaggtttggatggt
atactgaatttagtcactgggaagcagattgaagaaaaacctttaggtgcaaatggactt
ctcataagacgcatccaagaacagttcaaggcaaaatcagggatatcagagtctgcgtat
cacattgttacagatgcagcaattttgaggttcatggttgaggcctgctggggtcctatg
ttggctgcatttagcatgacccttgaccagagtgatgataagcttgctacttctcagtgc
ttacagggctttcgatatgcagtgcatgttaccgcagtaatgggaatgcagacccagaga
gatgcttttgtaacatcaatagcaaagtttacttatcttcataatgctgcggatatgaaa
cagaagaatgttgatgctgtgaaggcaataatatcaattgccattgaagatggtaataat
cttcaggaagcttgggagcatatcttaacgtgtctctcccggattgagcatctgcagctg
ctgggagagggtgcaccacctgatgcatctttcttaacatcatctaatgttgaagcagat
gaaaaaacatggaagtcaatgggttatccatctctaaagaaaaaaggaactctccagaat
cctgctgtaatggctgttgtcagagggggttcatatgacagcaccacagttggggtgaat
ttgccaggaccagtgaccctggagcagattaatcactttatttcaaatttgaatttgctt
gatcagattgggaactttgaattgaaccatgtatttgctaatagccagaggttgaacagt
gaagcaatagtagcttttgtgaaagctctttgtaaagtttcaatgtcagagttgcagtcc
ccaacagatcctcgtgtatttagcctcacaaaaatagttgaaattgcgcattacaatatg
aatcgcattagactggtctggtcccacatatggaatgttctgtcagatttttttgtatca
gttggattgtcagaaaatctctctgttgcaatatttgtgatggattcactgcggcaactt
gctatgaaattcttagagcgcgaagaactggcaaattacaacttccagaatgaatttctg
aggccatttgcgattgtcatgcagaaaagcagctctgcagaaattagggaattaattgtt
cgctgcatttcacagatggtcctcagtcgtgttaataatgtgaaatctgggtggaaaagc
gtttttttggtttttacagcggctgcagctgatgagcgtaagaatatagtcctgttggca
tttgagaccatggagaaaatagtgcgagagtattttccttatataactgagacagagaca
acgactttcacagattgtgtcagatgcctaacgaccttcacaaatagcagatttaatagt
gatgtaagcctcaatgccattgcatttctccggttttgtgctgtaaaacttgcagatgga
ggacttgtctggattcaaaagagcggggttgatgatttatccattcaatcgttaaatgag
atggcttctgatgaacaatctttaagtgacaaagatgatcatgcatcctactggatccca
ttactcacagggttatcacagcttacatctgatcccagatcagccattcgaaaaagttct
ttggaagtgctatttaacattctcaatgatcatggtcaccttttctcacgatcattttgg
aatgacattttcaactctgttattttacccatattcagtaatatgtatgacaagaaagat
aatcttgttaaagacggtcagtcttcaccagcttcagcctctccacagctggaaggaagt
ggatgggattctgaaacttctgcagtggcaacccagtgtttagtagatttatttgtcagt
tattttaatacagtgaggtctcaactatcaagtgtggtatcaatactgacgggattcatt
agaagtcctattcaaggtcctgctagcactggggttgcagctttattgcgcttatcaggt
gaactgggaagcagactttctgaggaggaatggaagaagatctttctagctctgaaggaa
gctgctgcatcaacattgccaggttttatgaaggtccttagaagcatggatgatattgag
atgcctgacagctcgggatcttatgcagatatggatactactcatcatggtttcaccaat
gatgaccgggaggatgacaatctccaaactgcagcttatgtagtttcgagagtaaagagt
cacattgctgtgcagctactgattttacaggttgtaacagatttatgtaaagcaaaccta
caattcttatcagcaaccaatattgggattcttcttgatatattttcatctattgcatcg
catgcccaccaactgaactctcagacaattctgcagaagaaattggagaaagcttgctcc
attctggagctatctgatcctcccatggttcattttgaaaatgagtcgtaccaaaattac
ctcaactttctccatgatttgcttgtggataatccatccatgtctgagttgatgaatata
gaattgcaacttgtggtagtctgtgaaaaaatattgcagatatatctaagttgtactggg
tcccaatccatgcaacagaaacctgttagcaagctggtggtacactggattcttccattg
ggttcagcaaagaaggaagaattggcagcaagaactactttgcttgtttcagctttgtgc
atattaagtgatctggaaagggactcctttaggaggtacgcttcccgattctttcctttg
ttggttgatcttgtgcggagtgagcatagctcgggagaagttcagcatctcttaagcaac
attttccagtcatgtataggcccagtactaatgggatga
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integrated database retrieval system
