Ricinus communis (castor bean): 8285409
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Entry
8285409 CDS
T01087
Name
(RefSeq) nuclear pore complex protein NUP1 isoform X1
Organism
rcu
Ricinus communis (castor bean)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calpain_u2
Motif
Other DBs
NCBI-GeneID:
8285409
NCBI-ProteinID:
XP_025012306
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Position
6:4353589..4366345
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AA seq
1295 aa
AA seq
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MAAAPQRNENPYEDRSGFGKFRKRPMRRVSTTPYDRPLTAIRNPSHATHVNNNNNWLSKL
VDPAQRLITSSAHKLFASVFRKRLPPPPPPPPEQPPEPEANGGASDKQQEAVCKDLRGIK
GSATNDFDCPASSSDKGGLTELERILKQKTFTRSEIDQLTALLQSRTVEIPVGTRENKYE
VIPSKGVLSHDRKEEFPNTPKKDNGLDSHCVSTPIVNSSVLDEDVASPAELAKAYMGSRP
SKISPLALGLRSQSIGEDAVTQIDRPFASKSPIMSIVPRSSSRVMPVVNGFVTPRSRGRS
AIYSMARTPYSRVHSASTLQGAGTENDSFGAPSSSSQSIWENSRSSGSRQGALKRRSSVL
DNDIGSVGPIRRIRQKSNLLPSSGTLSVRGTGVASSGVRHPLSEKQVLESEVSIGNGDNT
IRSSGITSVPSKSSEMASKILQQLNVLVSSRDKSPTKLSPSMLRGPALRSLENVDTSKFT
EAVQDDNNKLDIKHDGSLPDSRDSMLQKQDKFEENGPVKLAAAHGKLASALNGMVSTSLV
KNNVSDGKTVSSGTDPVVQSTPQKKRAFYMSAHEDFLELDDDDQSEKTVSDALPVEKEKL
DTTLAENKTSTAKAITLEKPATSLQAKSHAISMRNQTPPVLPDGFVVSEKASTFTDKAAS
LPSLSVQHPMENKKPSVSVTSDRASSAKESNAAPSLFRFEDKVSPKEPNGFPSSNFSSKT
ESAVPQLTFTSTSPAVTNSMSLRFDTSSDHKSGISSSFVFGAGDATKSLTKEQESDKPAD
TNNLKDGVVFNSTETVSSAVSMLSPAASAFSFGLAHNDSNVNGSLASIPSFSSPGPALAS
QNDSGQNILSSSTNLALNSSSNTNIISATTANINSGDLSLSASAPSFVSAPVLKFGAPVV
PSTSTSSMSPITGVESTESKNETSFSNLTNVTFGSASSPITSTGGSLLSVPSSAMKSTGS
SLFCVASSAVAISDTSSAIMTTGSTFNFSAGASTSAAAVTTGFNPFSAANTQTSAAGAVF
STSTQSMPTQFGSTALSPFGFSGSTAFSSGSSLFSSSSSSGKLFGSGTTFGSTSSTSEAN
PVSSTTTTTPVFGSNWPTTKSPTFGSSNSASSSTAFVFGASSASNAVASTTSVMFGSSPS
GSSGSVFNFGSAASATQLQPAFASPSSASTFGSSPGNNDQMNMEDSMAEDTVQATSTVPV
FGQQSTAPPSSGFVFGSTAPTGGNQFVSTPTVPAATNPFQFGGQSNLAAPQNQPPFQASG
SLEFNAGGSFSLGTNGGDKSNRKFIRVNRKTQRKK
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctccacaacgtaacgagaatccgtacgaagaccgaagtggttttggcaag
tttcgaaagcgtcccatgcgaagggtctcaacgacgccgtacgatcgaccgctaactgca
attcgaaaccctagccatgcgactcacgtgaataacaataacaattggttatcgaagcta
gtggatcctgcacagagacttattacttctagcgctcataagcttttcgcttctgttttt
cgaaaacggttacctcctcctccgcctcctccgccagagcagccgccggagccagaggca
aatgggggagcatctgataaacagcaggaagcggtttgtaaagatctacgtggcataaaa
ggatcagcaacaaatgattttgattgtccagctagtagttctgacaaaggtgggcttact
gaactggagcgaattttgaagcagaagacatttactaggtctgagattgatcaattgaca
gctttactgcaatcaagaactgttgaaatacctgtggggactcgagagaataaatatgaa
gtaatcccttcaaaaggggtgttatcacatgataggaaggaggagttcccaaatactcca
aagaaagataatggacttgacagccactgcgtttcaactccaattgtcaactcaagtgtt
cttgatgaggatgttgcttcacctgcagagcttgcaaaagcttacatgggtagcaggcct
tcaaagatatcaccactagcgctaggtttgcgcagtcagtctataggggaggatgcagtt
acacagattgatcgaccatttgcttcaaagtcgccaatcatgtcaattgttccaaggtct
tcaagtcgtgttatgcctgttgtaaatggttttgtaacaccaagatctcgaggccgatct
gctatatacagcatggctagaacaccatattccagagttcactcagcctctaccctccag
ggtgctggaactgaaaatgatagttttggtgcaccatcatcatcatctcaaagcatctgg
gagaatagcagatcttctggatctagacaaggggctttaaagcgaaggagttcagttttg
gataacgatataggatctgttggtcctattcgcagaattcgtcaaaaatctaacctctta
ccttcttctgggactctttctgtacgtggaactggcgttgcttctagtggtgttcggcat
cccttatcagagaagcaagttttagaaagtgaagtatcaataggaaatggggataatact
attcgcagttcaggtattacatccgtcccctccaagtccagtgagatggcttcaaagata
ttgcagcaactgaatgttttagtgtcatcgagggataaatcacctactaagttgtcacca
tcgatgctacgtggtccagctcttagaagcctggagaatgtagacacttcaaagttcact
gaggctgttcaagacgataataataagttggatatcaagcatgatggatcattacctgat
tcacgagattctatgttgcaaaagcaagataagtttgaggaaaatggtccagttaagctt
gctgctgctcatggcaagttagcttctgctttaaatggcatggtatccacaagtctagtg
aagaataatgtatctgatggcaaaacagtatcttctgggactgatcctgttgtgcagtct
actccacaaaagaagcgcgctttctatatgagtgcacatgaggattttctggagcttgat
gatgatgaccaatctgagaagactgtatctgatgcattgcccgtcgagaaagagaagctg
gataccactttggctgaaaataagactagtactgcaaaagccattacattggagaagcct
gccacttctttgcaagccaaatctcatgcaatttctatgcggaaccaaacacctccggta
cttcctgatgggtttgtggtttctgaaaaggccagcacatttacagacaaagctgcatct
ttgcctagtctttctgtccagcatccaatggaaaacaagaagccatctgtatctgtaaca
tctgatagagcttcgtcagcaaaggaatcaaatgctgctccttccttatttcgctttgag
gataaagtttcccctaaggaaccaaatggatttccttcatctaatttcagttctaaaaca
gaaagcgcagtgccacagttgacatttacgtctacttcaccagctgtgacaaactccatg
agcttaagatttgacacgtcttcggaccataaatcaggaatttcaagcagctttgttttt
ggtgctggtgatgcaacaaagtctctgacaaaagaacaagaatcagataaacctgctgat
acgaacaatttgaaggatggagttgtcttcaattcaactgaaactgtgtcatctgctgta
tcaatgttatcaccagctgccagtgcattctcatttggcttggcccacaatgattcaaat
gtaaatggttctcttgcatctatcccttcattttcttcccctggtccagctctagcttct
caaaatgattctggccaaaatattcttagcagctcaaccaatcttgctcttaacagcagt
agcaataccaatattatcagtgctacaactgcaaacataaatagtggcgacctctcttta
tcagcttcagcaccttcctttgtgtctgcaccggttttgaaatttggtgcccctgtggtt
ccatcaacttcgacctcatcgatgtcaccaattactggcgtagaatcaacagaatccaag
aatgaaacaagctttagcaatctaacaaatgttacttttggcagcgcatcctctccaatt
actagcactgggggcagtctgttgagtgtcccatcctcggcaatgaagagtacaggaagt
agcttattttgtgttgcgtcctctgctgttgcaattagcgacacatcctccgctattatg
accacaggcagtactttcaatttcagtgctggagcgagtacttcagctgctgctgttact
actggttttaatccttttagtgccgctaatactcagacatctgcagctggtgctgttttt
tcaacttctactcagagcatgcccactcaatttggttcaactgcattatctccttttggg
tttagtgggagtacggccttttcatctggaagttccttgtttagttcttcaagttcgagt
ggtaaactgttcggttcgggtactacttttggatcaacctcctctacttcggaggccaac
cctgttagctccaccactactactacaccagtgtttggttctaattggccaacaactaaa
tctcccacgtttggttcctccaattctgcatcttcctctactgcgtttgtgtttggagca
tcctcagcttctaatgctgtagctagcaccacatctgtgatgtttggatcatctcctagc
ggttcatctggttctgtttttaacttcggctcggctgcttcagctacccaattgcagcct
gcatttgctagcccaagttccgcctccacctttggttcatctcctggtaataatgatcaa
atgaacatggaggacagcatggctgaggacacagttcaggcaacgtctacggttcctgta
tttggtcaacaatcaactgcacctccatcgtctggctttgtatttggttctacagctcca
acaggaggtaatcaatttgtctctacacctacagttccagcagcaacgaatccttttcaa
tttggaggccagtcaaatctggcagcaccacagaaccagcctccctttcaggcttctggt
agtctagagtttaatgctggagggagcttctcattgggcactaatggtggtgacaagtcc
aatagaaagtttatcagagtaaacagaaaaacccagcggaagaagtga
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