Ricinus communis (castor bean): 8285437
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Entry
8285437 CDS
T01087
Name
(RefSeq) trans-Golgi network-localized SYP41-interacting protein 1 isoform X1
Organism
rcu
Ricinus communis (castor bean)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crescentin
ERM_helical
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
8285437
NCBI-ProteinID:
XP_002515023
UniProt:
B9RMQ4
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All DBs
Position
7:complement(27794968..27802886)
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AA seq
1987 aa
AA seq
DB search
MSESNDSVELSLQNGEEEEAEEEKEEPSSNGHVVDPQIYINQELEQEQEEVNHVDSKEDM
FVDAADDIEDNQFQEMDNNGDTDNEVNQDDKDTVSKEYKEEREQISKEVANLLHQLKNLS
NNEDSEELVCGSGSLNEMMSECSQYVKVSLEQKLQTENMIRKLQQQIEELNMKIQVEQNV
DMVADRVLGVLNMVVNQEELVDYSVIGKLAHVERSTYLLVEQYRWFLYEVDKLRHCLVEG
GFSVGQHEEFGYEFAVARNQLLELKKTEAEMLGKVSYLEDVNRKLVEEVEKEKEMAGIVN
SEFEKVKMELEQEKNRYANTKEKLGMAVTRGKALVQQRDSLKQSLAEKTSELEKCLVELQ
EKSNVADSAELCRGELAKCENLAATLQETLSQRNAVLESCEEFLSHTSVPEELQSLDITD
KLKWLVNQVASLQETVLQNNAVFQTSNEIFSQISISEDIESMDMIERLKGLVNLVTSLQE
MISQRNKILISLEDMISEVNAPVELQSMDAVQRFKWIMEERDALKSNLLEFHRLKDALSL
IDIPETTSSSDLETRIGWLKDSVKQAKDEINMLQEEIARTKEAAHKEIDSLSGALLAELQ
EKEYAKMELDELAQKYEEISQEAHQASLEKDQMVRLLLEGSGIEDTYSDVATLVERCFGK
VKEQSTASSFDASPADAEVFERIQSLLYVRDLELMFYAKFLEEDALVQLEVNNLSNELRV
ASVELAALKEEKDSLRKTLEQSEERSALLKEKLSLAVKKGKGVFQDLKNLKLTLDDKNSE
IEKLKLELQHQESAMSECRDQISRLSADLEQALKLEADLVDMKNQRDQFEQFLLESNSML
QRVIESVDRIVLPPDLDFEEPIEKVNWLAGYMNECQIAKSKAEQELGNIKEETIIMAGKL
AEAEESIKYLEDALSASENHISQIAEEKQEIEVAKENIEQDLKKAKEEAHAQTSNFNEAC
ATRKSLEDALSLAENNISLFVKEKEEAQLSRAATETELEKVREEAAVQTEKLTEAYRTIK
SLEAALSQAEVNGSLLSEQNNHFQVERTDLENELKKLKEEAESHASRLEDTTTTMKQLEE
AKLSRAAMETELEKAREEVAGQTEKLTEAYRTIKSLEVALSQAEANITLLSEQNSLFQVG
RTDLENELKKLKEEAESLACRLADTSITIKQLEDAQLGRAATETELEKVREEIAFLTEKL
TEAYSTIKSLEDALSQAEANISLLSEENNHFQVGRIDLESELEKLKEKATSQASRLADTS
ATIKSLEDALSKAGNIISGLEGEKRIAEQEISALNSRLRAYMDELPGTNGSLENRSAELI
HHLGDIQMLVRNERLLSMARQHFEEEFEKLRNMDLILRDIKGHLVNKSSEVLPSHPIMEE
DLHLIKPFPHDLGNIIDTEMDDSNLNAADVDSISKLLKKTVEEFQLRNSNLVGNFDGFFT
FITELIDALLVKLRVTKDAVANIFEHMEFVKQKMMNMEMDKGEQDKTIAMLEKDCRVLLS
ACANATSRLQFEVKNNLLDLCSIPELEKLKNSMIPEVTELDSDEMEHGSRYENMAEILLL
AARKVHTLTKLFESTSNVAASTIEDLQKKLRESRAAYESTIEERDMIQKRVSKLETDVDI
LQNSCKELRLKTEDYQVIEEKLKETEAELLHNNLSMKEQEAEHVLMSPSELKTLYDKIRK
VEIPNVESEVGDLESHNLVDVQKLFYIIDSASELHHQMNTLSHDKDKLQSTLAMQVLEIE
HLKEEIETLIRNNQESEKAKTEIAEVTLVLDKIISMLGGSEIVGDQKSASAQRLLPLVEK
QITALIWEAKNSKSEAQELGARLLGSQKVIDELSTKVKLLEDSFESKTVAPEIVQERRIF
EAPSLPTGSEISEIEDVGPVGKNTISPVASAAQLRTMRKGSTDHLVLNVDSESASLINNE
ETDEDKGHVFKSLNTSGLIPKQGKSLADRIDGIWVSGGRILMSRPRARLGLIAYCLVLHL
WLLGSIL
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaagtaatgattcagtggaattatctctccaaaatggagaagaagaagaagca
gaagaagagaaagaggaaccatcatcaaatggacatgttgttgatcctcaaatttacatt
aatcaggaactagaacaagaacaagaagaggttaatcatgtggatagtaaagaagatatg
tttgttgatgcagctgatgatattgaagacaatcagtttcaagaaatggataataatgga
gatactgataatgaggttaatcaagatgataaagatactgtttcaaaagagtacaaggaa
gaaagagagcaaatttcaaaggaagttgctaatcttttacaccaactcaagaatttgagt
aataatgaggattcagaagagttagtatgtggtagtggttcattgaatgagatgatgagt
gagtgttctcagtatgttaaagtttctttggaacagaagttgcagactgaaaacatgata
aggaagcttcaacaacagattgaagagcttaacatgaagattcaagtggaacagaacgtt
gatatggttgcggatagggtgttgggtgttcttaatatggtagtcaatcaagaagagttg
gtggattattctgttattgggaaacttgctcatgttgagagaagtacttatttgttagtg
gagcagtatagatggtttctttatgaagttgataaactcaggcactgcttggtagaggga
ggtttcagtgttgggcagcacgaggagtttggttatgaatttgctgttgcccgtaatcag
ttgctggagcttaaaaaaacagaagcggagatgttgggaaaagtaagctatctggaagat
gtaaataggaaattggttgaggaagttgagaaggaaaaagaaatggcagggattgtgaac
tccgaatttgaaaaggtaaagatggagcttgagcaggaaaagaataggtatgctaatact
aaagaaaagctcggtatggctgtgacaagagggaaggcattggttcagcagcgagattca
ctaaagcagtctctggctgagaaaacaagtgagcttgagaaatgcttggttgaattgcaa
gagaagtcgaatgttgctgattctgctgagctatgcaggggggagttggctaaatgtgaa
aacttggctgcaacattgcaggaaacacttagccaaaggaatgcagttcttgaaagctgt
gaggaatttctatctcacaccagtgtacctgaggaacttcaatcattggatattactgat
aaattaaaatggcttgtgaatcaggttgcctcactgcaggaaacagttttgcaaaataat
gcagtttttcaaacttctaacgaaatattttctcagattagtatttccgaggacatagag
tcgatggatatgattgagcggttgaaagggcttgtaaatttggttacatcactgcaggaa
atgatatcacaaagaaacaaaattctcatcagccttgaagacatgatttcagaggtcaat
gcacctgtagaacttcaatcaatggatgctgtgcagagattcaaatggattatggaggag
agagatgctcttaagagtaatttgctggaattccacagattgaaagatgctttatcttta
attgatataccagaaactacttcatcttctgatttggaaactcggataggttggcttaag
gattcagttaaacaggcaaaagatgaaataaacatgttgcaagaagagattgctagaacc
aaggaagctgcacataaggagattgacagtttaagtggtgcacttttggcagagttacaa
gaaaaggaatatgctaaaatggagctggatgagctagcacagaaatatgaagagatttct
caagaagcacatcaagcttcattggagaaggatcagatggtgaggctgttgttagagggt
tctggaatagaggatacttattctgatgtggctacactcgttgaaagatgctttgggaag
gtaaaagaacaaagtactgcttcttcctttgatgcttctcctgctgatgctgaggtgttt
gaaagaatacagagtctattgtatgtcagggatttagaattgatgttctatgcaaaattc
ctcgaagaagatgcactagtgcaattagaggtgaataatctgtctaatgaattgagggtg
gcatctgtagaacttgctgcactgaaggaggaaaaagactctctacggaaaactcttgag
caatcagaagagagatctgctttgttaaaggaaaagttgtcattagcagttaagaaaggc
aagggagtgtttcaggatctaaaaaacttgaaacttactcttgatgataagaactcagaa
attgagaagttgaagctcgaactacaacatcaagaatctgcaatgtctgagtgcagagat
cagataagtagattgtctgctgatctagagcaagccctaaagttagaggccgaccttgtt
gatatgaaaaatcaaagagatcaatttgagcaattcttactggagagtaacagcatgtta
cagagagtgattgaatcagttgaccgtattgtacttcctccagatttagattttgaagag
cctatagaaaaagtgaactggcttgcaggctacatgaatgagtgtcagatagccaagtcc
aaagcagagcaagagttgggtaatattaaggaagaaaccattattatggctggtaaatta
gcagaagcagaagaaagtataaagtatctggaagatgcattgtcagcttcggagaaccac
atatctcaaattgctgaagagaagcaggaaatagaagttgctaaggaaaatattgagcag
gacttgaaaaaggcaaaagaagaagctcatgcccagactagcaactttaatgaggcttgt
gcaactagaaagtcccttgaagatgcattgtctctggcagaaaataacatttctttattt
gttaaagagaaagaagaggctcaattgagcagagctgccacagagacggaactagagaaa
gtgagagaggaagctgctgttcaaactgagaagctgactgaggcttatagaactataaag
tctcttgaagctgcactctctcaagcagaggtcaatggttctttgctttctgaacaaaac
aatcatttccaggttgaaagaactgatttggagaatgaactaaagaagctaaaagaagaa
gccgagtcacatgctagtaggctggaagataccacaacaactatgaaacaactggaagag
gctaaactgagcagagctgctatggagaccgagctagagaaagccagagaggaagttgct
ggtcaaactgagaagctgacagaggcttatagaactataaagtctcttgaagttgcactc
tctcaggcagaagctaatattactttgctttctgaacaaaacagtcttttccaggttgga
agaactgatttggagaatgaactaaagaagctaaaagaagaagctgaatcactggcttgt
aggttggcagatacctctataactataaaacaactggaagatgctcaactgggcagagct
gctacagagaccgaactagagaaagtgagagaggaaattgcttttctaactgagaagctg
acagaggcttatagcactattaagtctcttgaagatgcactttctcaggccgaggcaaat
atatctttgctttctgaagaaaacaatcatttccaggttggaagaatcgatctggagagt
gaactagagaagctaaaagaaaaagctacttcacaggctagtaggttggcagatacttct
gcaaccataaagtcactggaagatgctttgtcaaaggcaggaaacattatttccgggctt
gaaggtgaaaagagaattgctgagcaggaaatttctgcacttaattccaggttgagggca
tacatggacgaactacctggaacaaatggtagcttagagaacaggtccgcagagctcatt
catcaccttggtgacattcaaatgcttgtgagaaatgagagattgttatccatggccaga
caacattttgaggaggaatttgaaaaacttagaaacatggatctcattctcagagacata
aagggccatcttgttaataaaagttcagaagtcctgccaagtcaccctatcatggaggaa
gatttgcatctaataaaacctttccctcatgaccttggaaatatcatagacacagaaatg
gatgatagcaatttgaatgctgcagatgttgatagtatttccaaacttcttaagaaaacc
gttgaggagttccagttgcgaaattcaaatcttgtaggcaattttgatggtttctttaca
ttcataactgagcttattgatgctcttttagtaaaactaagggtaaccaaggatgcagta
gccaatatctttgagcatatggagtttgtgaagcagaaaatgatgaatatggaaatggat
aaaggggaacaagataaaacaattgccatgttagaaaaggattgtagagttttattatct
gcttgtgctaatgccacaagcagattgcagtttgaagttaagaacaatcttctggacctg
tgctctattcctgagcttgaaaagttgaaaaatagtatgattccagaagtaactgaactt
gatagtgatgagatggagcatggcagcagatatgaaaacatggccgaaatcttgttattg
gctgcaagaaaagttcatactctaaccaaactatttgagagcacaagcaacgtggcagct
tccacaattgaagacttgcagaagaaattgagagaaagcagagcagcttatgaaagtacc
atagaagaaagggatatgattcagaagagggtttctaagttggagacagatgtagatatc
ttacaaaattcttgcaaagagctgaggctcaaaacagaagattatcaagtcatagaggag
aagttgaaggaaacagaagcagagcttctacataacaatttgtcaatgaaagaacaagaa
gcagaacatgttctcatgtcgccatctgaactgaaaaccctttatgataagataaggaag
gttgaaattcctaatgtagagtcagaagttggagatttggagtcccataatttggtggat
gtacagaaactgttttacatcattgatagtgcatctgagttgcaccatcaaatgaataca
ttatcccatgacaaagacaagctacaatcaaccctggcaatgcaggttcttgaaattgaa
catttaaaggaggaaattgaaaccctcattagaaataaccaagaatctgaaaaggcaaag
actgaaattgctgaggtaacattagttttggataaaattatcagtatgttgggaggtagt
gaaattgttggagaccaaaaatctgctagcgcacagagacttttgccactagtagaaaaa
cagatcacagccttgatttgggaagccaaaaattcaaaatccgaagctcaagaacttggt
gcaaggttgcttgggagccagaaggttatagatgaattgtcaaccaaggttaaactgctt
gaagattcatttgaaagtaaaactgttgcaccagagattgttcaggaaaggagaatcttt
gaagcaccttcattacctactggttcagagatatctgaaattgaagatgtgggtccagtt
ggaaagaatacaatatctcctgttgcctctgctgctcaattgcggactatgcggaaaggg
tcaactgaccatcttgttctcaatgtggattcagaatctgctagtctgatcaacaatgaa
gaaactgacgaggataaaggtcatgtgttcaagtctctcaacacatcaggtctcattccc
aagcaagggaagtcacttgcagatcggattgatggaatatgggtttctggtggtcgaatt
ctaatgagtcgtcccagagcgaggttggggcttattgcctattgtttggtcttgcatcta
tggctattgggatccattttgtaa
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integrated database retrieval system
