Ricinus communis (castor bean): 8285451
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Entry
8285451 CDS
T01087
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8285451
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
8285451
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
8285451
NCBI-ProteinID:
XP_002515037
UniProt:
B9RMR8
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Position
7:complement(27708302..27710294)
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AA seq
404 aa
AA seq
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MAIPFLLLIFFLLLVAPNRIASSSPVQDPELVVEEVHRSINASRRKLGYLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSGNDDPVNPKPGTLRHAVIQE
EPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIHGINIHDC
KRGGNAYVRDSPSHYGWRTISDGDGVSIFGGSYVWVDHCSLSNCNDGLIDAIHGSTAITI
SNNYMTHHNKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSANPTINSQGNRFLAPNDRFNKEVTKHEDAAQNEWKHWNWRSEGDLLLNGAF
FTASGFGASSSYARASSLGARPSSLVSSITAGAGSLVCKKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcctttcttacttttaatattcttcttgctccttgtagccccaaaccgcatt
gcctcctcttcacctgttcaagatcctgaacttgtagtagaagaagtgcacaggagcatc
aatgcatcaaggagaaagttgggttatctttcctgcggcacagggaatccgatcgatgac
tgctggcggtgcgaccccaactgggagaagaaccggcagagactagcagattgcgcaatc
ggatttggaaaacatgccattggtggtagagatggtaagatatatgttgttacagattca
gggaatgatgatcctgttaatcccaagccaggaactttaagacatgctgttatccaagag
gaacctttgtggataatcttcgctcgtgacatggtgatcaagttgaaagaagagctgatc
atgaattctttcaagactattgatggaagaggagccagtgtacatattgctggcggtcca
tgtattactgtacaatatgttactaacattataattcatggtataaacattcatgactgt
aagagaggagggaacgcttatgttagggactcgcctagccattatgggtggaggaccata
tcggacggcgatggagtgtccatcttcggagggagctatgtgtgggttgatcattgctct
ttgtctaactgtaatgatgggttgattgatgctattcatggttccacagccattaccatc
tcaaacaattatatgacccatcataacaaggttatgttattgggtcatagtgatagtttt
actcaagacaagaacatgcaggtcaccattgccttcaaccattttggagaagggcttgtc
cagagaatgccaagatgtagacatggatattttcatgtggtgaacaatgactacacacat
tgggaaatgtatgcaattggtggcagtgctaatcctacaataaatagccaaggcaacaga
tttcttgctcccaatgatagatttaacaaagaggtgactaaacatgaggatgcagcacag
aatgaatggaagcactggaattggaggtccgaaggagacctgttgctaaatggtgcattc
tttacagcatctggctttggagcttcttctagttatgcaagagcatccagcttaggtgca
agaccatcttctctagtgagttcaattacagcaggagcaggttcacttgtttgcaagaag
ggttcacgttgctga
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