Ricinus communis (castor bean): 8285457
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Entry
8285457 CDS
T01087
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8285457
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
8285457
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
BaxI_1
Motif
Other DBs
NCBI-GeneID:
8285457
NCBI-ProteinID:
XP_002515043
UniProt:
B9RMS4
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Position
7:27666184..27671306
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AA seq
819 aa
AA seq
DB search
MSAPTGRSPEPLIASGKSSEKLSLPTLQSKMKIDPEGYETELSLLYSQFNSALELFQQQS
ALNFTSSSSGICADPTIAKELGDRAMFLAHMTPFYPKQLANFPSELSEFLKSSSKSLPSG
LRSHVSQALILLINRKMVDISETLGLFMELQTLGDRNLKKLAFSHVVHSIRRMNKKHKND
AKNRVLQNILFEILQQEDEGRAKRSLITLCELHRRKVWFDDRTANAICMACFHSSSRIMI
AAMSFLLDFEKIEDDNSDDSDASSEDDSNTHLPRVLLSKEAVYKAHHKGTVSSKKKKKAK
LQRAMRSMKRQHRLSSDKSSSNYYSPLSHLKDAQGFAERLLSRLQTCNERFEVKMMMLKL
IARTVGLHQLILLNFYPFVQKYVQPHQRDITNLLAAAVQACHDMVPPDAVEPLFKQIVNQ
FVHDRSRPEAIAVGLNVIREICLRMPLLMTEDLLQDLVLYKKSHEKAISAAARSLMILFR
EVCPSLLIKKDRGRPIDPKAKPKAFGEVNVASNIPGVELLQHDDDDDDHSDNDHDESNGD
MDNLESSGHHDDYDDETAAPSDDEENEISNDDSGSEDGDLEDDSVDEDDHNSVDENESDD
GNNSIDENDSDDCANSIDESDSDLSDGDAEEHEKVTKGMKEVNESKASKRKFSDFDGKLI
DADTSLRALKRLAEEKSNHTSSDLADGILSNEDFKRIKELKAKKEAKVALTRQGIKVPSS
DQLSVKRVDPSKLEAHVRHKLSKEERLALVKAGREETGKYQARTAIKKKKTGGKSNRQKQ
HEKLMPSAARKARAERSRQEKKRKQTRSGKQFRGKKAWK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccaaccggccgttcaccggagccgctcattgcgtccgggaagagttccgag
aagctaagtctaccaacactacaatcaaaaatgaaaatagacccagaaggctatgaaaca
gaacttagccttctatatagccaattcaactcagctcttgaactctttcaacaacaatca
gctctcaattttacatcttcgtcctccggaatttgcgctgaccctactatagctaaagag
cttggtgatagagcaatgtttttagctcatatgactccgttttatcccaagcaactcgct
aatttcccgagtgaactctctgagtttctcaaatcttcttctaaatcacttccgtctggg
cttaggtctcatgttagtcaggctcttattcttttaattaatagaaagatggttgatatc
agtgaaactcttggattatttatggagctacaaaccttgggagatagaaacttgaaaaaa
ttggcgttctctcatgttgttcatagcattaggcgcatgaataagaaacacaagaatgat
gccaagaatcgagtgctacagaatatcttgtttgaaatcctacagcaagaagatgaaggg
agagctaagagatctctcattacactatgtgagcttcatcggagaaaggtgtggtttgat
gatagaacagcaaatgcaatttgcatggcatgtttccattcatcatcacggatcatgatt
gctgccatgtcttttcttctggattttgagaagattgaggatgacaatagtgatgatagt
gatgcttctagtgaagatgactcaaatactcatttgcctcgagtgctcctcagtaaagaa
gctgtttataaggcgcatcataaaggcactgtatccagtaaaaagaaaaagaaagcaaaa
ctgcagcgtgccatgcgcagtatgaaaaggcagcatcgcctgtcatcagataaaagcagt
tcaaattattattcacctcttagccatcttaaagatgctcagggatttgctgagaggcta
ctttctcgtcttcagacttgcaatgaacgttttgaggttaagatgatgatgctgaaatta
attgctcgaactgttgggcttcaccagttgattttattgaacttctatccttttgtccag
aaatatgttcagcctcatcaacgtgatatcacaaatttacttgcagcagctgttcaggca
tgccatgatatggtgcctccagatgcagttgaaccattattcaaacaaatagtgaatcaa
tttgtacacgatcgttcacgtccagaggctattgctgttggactgaatgtgataagggaa
atatgcttgagaatgcccttgttgatgacagaagatttgctgcaagatcttgtgttatat
aaaaaatcacatgaaaaggcaatttcagctgcagctaggtcgcttatgatattatttaga
gaggtttgtccttcactgttgattaaaaaggatcggggtcgtcccattgacccaaaggcg
aagccaaaagcatttggagaagtcaatgttgccagcaacatacctggtgttgagttgtta
cagcatgatgatgatgacgacgaccacagcgacaatgaccatgatgaaagtaatggcgat
atggataatttagaatccagtggacaccatgatgattatgatgatgagacagctgcccca
agtgatgatgaagaaaatgagatttccaatgatgattctggaagtgaggatggtgattta
gaagatgactcggtggatgaagatgaccataacagtgttgacgaaaacgaaagtgatgat
ggcaataacagtattgatgaaaatgacagtgatgattgtgctaatagtattgatgaaagt
gacagtgatttgagtgacggtgatgcagaggaacatgaaaaggtgaccaagggcatgaaa
gaagttaacgaatctaaagctagcaagaggaagttctctgattttgatggaaaacttatt
gatgccgatacaagtcttcgagctcttaagagactggcagaagaaaagtcgaaccatacc
tcgtctgatctagcagatggtattctttctaatgaagactttaaaaggatcaaggaattg
aaggcaaagaaggaagctaaagtggctttaactaggcaagggattaaagttccaagctct
gatcaactgagtgttaagcgggtggatccttccaagctagaagctcatgtgcggcataag
ctcagcaaggaagaaagattggcattggtgaaagcagggagggaggaaacagggaagtat
caggctcgaactgccataaaaaagaaaaagaccggcggtaaaagcaataggcagaagcaa
catgagaagttgatgcccagtgctgccaggaaggccagggctgaaagatctcgtcaagag
aaaaagagaaaacagactcgatccggcaaacaatttaggggtaaaaaagcttggaaatga
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