Ricinus communis (castor bean): 8285470
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Entry
8285470 CDS
T01087
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8285470
03015 mRNA surveillance pathway
8285470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8285470
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8285470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
8285470
NCBI-ProteinID:
XP_015572227
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All DBs
Position
7:complement(27584379..27591482)
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AA seq
639 aa
AA seq
DB search
MGAFKLELRCPQRVNEVGVDPNPDWSFDSLLSELSSLENKLNNSSSAPFTKTLSRGFSSR
QIVNRRSRRAFVMRVSDDEVEDNDSEGDDEKDHTQSLVVAKRFNYDDIHLCDSDDSDYEN
DLDSYSYLMEKVGLVESSLFELSQEHQLGVKEEIRNQISALEMELMRESEKSNSAFNRVE
KYREARKESDRKFDTQYQRKIAEALDNHLTSIQRDHELKSQIEERKIRSDAAHEEARRKE
KALQEERLRQERARAEAEAKRKAEEAKMAALEAERKAAKEAAEKEAAEASKKQAATVSGE
DVAGNRVHASSANWDVNSQGAVSNGTNKSQLAGSIIRAAESALSLEQKRLEKLRALEEQN
RSLKLSSNMDFSSHERHVARLIKQIRGTKENVRAKSSELVKLCQNPSCPQSISIAAIATF
PKKVASQSELPDSAVFACAYVIVMVTSQVPHSMNLLLAEFHRGCIYTVPRHVTYSKSAFE
SKEAYQKTIGYQEQNGKIESTTDYLKRLECYMRLYGALVQTEVQGFQNSHGPNEGWAWLA
RFLNNLPANIYTAVALNGFLKTAGFVLFRKYRSQFGKMLNIIYNDFLEALRKRQDSGLNA
TVAEIQSYIQDKKFLQEPEGARLQGSLVSHVIGGQPEFR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatttaaattggaacttcgctgtccgcaaagggttaatgaagtcggagttgat
ccaaatccagattggagttttgattcgctgttatcagagctcagttcacttgaaaacaag
ctcaataactcctcctcagctccttttactaaaaccctgtcacgaggattttcgagcagg
caaattgtgaataggcgttcaaggagggcatttgtaatgcgagtttctgatgatgaggtt
gaggataatgacagtgaaggggatgatgagaaggatcatacgcagagtttagtagtggca
aaacggttcaattatgatgatattcatctttgtgatagtgatgactctgattatgaaaac
gatcttgattcctattcctatttaatggaaaaagttggattagtggaaagttccttgttt
gaactaagccaggagcatcagcttggagttaaggaggagattaggaaccaaatctcagca
ttggagatggaattaatgagagaaagtgaaaagtcaaattctgcattcaaccgagttgag
aagtatagagaggcaagaaaggaatctgacaggaaatttgatactcaatatcagcgtaaa
attgcagaagcactagacaatcacttaaccagtatccagcgggatcacgaattgaaatca
caaatagaagaaaggaaaataagaagtgatgcagcgcatgaagaggctagaagaaaggaa
aaggctttgcaagaagaaaggctgcgtcaagagagagctagagcagaagcagaggctaaa
cgcaaagctgaggaagcaaaaatggctgctctagaagcagagagaaaagcagcaaaggaa
gctgcagaaaaagaagctgctgaagcctctaaaaagcaagctgctacagtctcaggagag
gatgttgctggaaaccgagtacatgccagttcagccaattgggatgttaattctcaagga
gctgtatctaatggaactaataaatcacaattagcaggtagcattataagggctgcggaa
agtgctcttagtctagagcagaaaagactggagaagcttagagcactggaggaacaaaac
cgatcactgaagttgagttccaatatggatttcagcagccatgaaagacatgttgctagg
ttgataaaacaaatacgggggacgaaagaaaatgttagagcgaaatcaagtgaacttgtt
aagctttgccagaatccttcatgccctcaatccatcagtattgcagcaattgcaactttt
ccaaagaaggttgcttcccagtctgaacttcctgatagtgccgtctttgcatgtgcctac
gtcattgttatggttacctcacaggttccacattcaatgaatctgcttctagcggagttt
catagaggttgcatctacactgtcccaaggcatgtaacatactcaaagtcagcatttgaa
tcaaaagaggcttatcaaaaaaccattggataccaagaacagaacgggaagattgaaagt
actacagattatttgaaaagattagaatgctacatgagattgtatggagctctggttcag
acagaagtccagggtttccagaactctcatggtccaaacgagggttgggcttggcttgca
agattcttaaataaccttcctgccaatatatacactgctgttgcattgaacggattcctg
aaaacagcagggtttgttctgttcagaaaatacagatctcagtttgggaagatgctgaac
atcatctataatgacttcctagaggcactcagaaaacggcaagattcagggctgaatgca
acagttgcggagattcaatcctacatacaagacaaaaagttccttcaggagccagaagga
gcaaggctgcagggctcattggtatctcacgttattggcggacaaccagaattcagataa
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