Ricinus communis (castor bean): 8285494
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Entry
8285494 CDS
T01087
Name
(RefSeq) LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 4
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8285494
Membrane trafficking [BR:
rcu04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
8285494
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COG4_m
COG4_C
PPR_2
PPR_1
PPR
COG4_N
PPR_3
PPR_long
RINT1_TIP1
Sec10_HB
ZW10_C2
MRP-S27
Motif
Other DBs
NCBI-GeneID:
8285494
NCBI-ProteinID:
XP_002515075
UniProt:
B9RNK4
LinkDB
All DBs
Position
1:9851450..9860720
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AA seq
1217 aa
AA seq
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MHQPLLRSSIKVAIAVTRSVVFPPNPKPELLFFYSSSAYQRHQGREQKTKKLYQELSDPN
SNSPIGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLVLILKLGRSKYFSLI
NDLILDLKSKHYPVNSNLFSYLIKIYGEANLRDKVLKTFYTMLQFNFKPLPKHLNLILEF
LVSHRNYIKPALDLFNNAHRYGVFPNKKSYNILMRALCLTGELSVAYKLFNQMFKRDVLP
DIESYRILMQGLCRRSQVNGAVGLLEDMLNKGFVPDCLTYTTLLNSLCRKKKLREAYKLL
CRMKVKGCNPDIVHYNTIISGFCREGRAMDARKVLGDMECNGCLPNLVSYRTLVAGICDQ
GMFDEAKSYLEEMILKGFSPHFSVSHALVKGFCIVGKIEEACGVVEVLLKHGEVPHADTW
IIILPRICEVDDLEGIRQSLDKAMMVEIMGDTRIVEAGIGLEDYLIKKAQPKWRAXILSV
QRSQADDESTTTVSSIKFGTREALDHVRNLTDVGAMTRLLHECIAYQRALDLDLDNLLAQ
RTDLDKNLIHLQKSAEVLDIVKSDSDYMLSNVRSTCDLADHVSAKVRELDLAQSRVNITL
SRIDAIVERGNCIDGVKNALESEDYEAAANYVQTFLQIDAKYKDSGSDLRDQLLASKKQL
EGIVRKRLAIAVDQRDHQTILRFIRLFSPLGLEEEGLQVYVGYLKKVISMRSRLEFEQLV
ELMEQINNNNHNNSNNQVNFVSCLTNLFKDIVLAIEENDGILRSLCGEDAIVYAICELQE
ECDSRGSLILKKYMEYRKLAKLSSEINAQNMNLVNVPDPREVELYLEEILTLMQLGEDYT
EFMVSKIKGLSSVDPELVPRATKSFRSGSFSKVVQEVTGFYVVLEGFFMVENVRKAIAID
EPVPDALTTSMVDDVFYVLQSCLRRAISTSSISSVIAILSGASALLSNEFNDTLQQKMRE
PNLGAKLFLGGVGVQKSGTEIATALNNIDVSSEYVQKLKHEIEEQCAQVFPASADREKVK
SCLSELGDMSNTFKQALNAGMEQLVATVTQRIRQVLDSVTTISYELSEAEYADNEVNDPW
VQRLLHAVETNVSWLQPVMTANNYDSFVHLVIDYIVKRLEVIMMQKRFSQLGGLQLDRDI
RALVSHFSSMTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRV
LGLRVDFKPEAISALKL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaccacttctgcgttcctccatcaaagtcgctatagctgtcactcgctcagtc
gtcttcccgcctaacccaaaaccggaattactcttcttctactcctcatcagcataccaa
cgccaccaaggccgagaacagaaaacgaaaaaattatatcaagaactttcggatcccaac
tccaattctccgattgggtcaccatgtcgagtccaaaaactcatagcttcccagtcagat
cctctactggccaaagaaatcttcgattacgcctcacggcagccaaattttcaacattca
tactcttcatatctcgttctcattctcaaacttggtcgatcgaaatacttctctctcatt
aatgatttaattcttgacctaaaatccaaacattatccagtaaattccaatctattctct
tacttaattaaaatctatggagaggcaaatctgcgagataaggttctcaaaacattctac
acgatgctacagtttaacttcaagcctttgcccaaacacttaaacctcattcttgaattt
cttgtttctcatagaaactatatcaaacctgctttggatcttttcaacaatgctcataga
tacggtgttttccccaacaagaaatcttacaacatcttaatgcgtgcgctttgtcttact
ggggaacttagtgttgcatacaagctgttcaatcaaatgtttaaaagagacgtgttaccg
gatattgaatcttatcggattttgatgcaggggttgtgtagaagaagtcaggtgaatgga
gctgttggtttgttagaagatatgctgaataaagggtttgtgcctgattgtttaacttac
actactttgttgaatagtttgtgtaggaaaaagaagcttagggaggcatataagcttctt
tgtagaatgaaggttaaagggtgtaaccctgacattgttcattacaatactattatatcg
gggttctgtagagaagggcgtgcaatggatgctcgtaaggttcttggagatatggagtgc
aatgggtgtctgccgaatttagtgtcttacaggactttggttgctgggatatgtgatcaa
gggatgtttgatgaggcaaaaagttatttggaggagatgattttgaagggcttttctcca
catttttcagtttctcatgctctggtgaaggggttttgtattgtgggtaagattgaagaa
gcttgtggagtggtggaggtattgctgaagcatggagaggttcctcatgccgatacttgg
atcattatattgcctaggatatgtgaagtagacgatttggaggggatacgtcaaagttta
gataaggctatgatggtagaaatcatgggcgataccagaattgttgaggctggtattggt
ttggaggactacttgatcaagaaggcacaaccaaaatggcgagcttgaattctttctgta
caaagatctcaagcagatgatgaatcaacaacaacagtatcctctataaaattcggcaca
cgggaggctctagatcacgtgcgaaacctaaccgacgtcggagcaatgacgcgtctgctc
catgaatgcatcgcataccaacgcgctctcgatctcgacctcgacaacctactcgctcaa
cgcaccgatctcgacaagaacctaattcaccttcaaaaatcagcagaagtacttgacatc
gttaaatcagattccgattatatgctttctaatgtgcgttccacatgtgacctagctgac
catgttagcgccaaggttcgtgagcttgacctggcacaatcaagggttaatatcacgctt
tcacgaattgatgcgattgtagaaagagggaattgtatagacggagttaaaaatgctctt
gaatcggaggactatgaggcggcggctaattatgtgcaaacgtttttgcaaatagatgcg
aaatataaggattcagggtcagatctgagagatcagttactggcgtcgaagaaacagctg
gaaggcattgtgaggaagcggcttgccattgcagtggatcagcgcgatcatcaaacgatt
ttgcggtttattagattgttttctcctttaggattggaagaggaaggtttacaggtttac
gtaggttatttgaagaaagtgatctctatgagatctagacttgaatttgagcaattagtg
gagttgatggaacaaattaataataacaatcataataacagtaacaatcaggttaatttt
gtttcgtgtttaactaatttgtttaaggatattgttttggctattgaggaaaatgatggg
attttgaggagcctttgtggtgaggatgcgattgtttatgctatttgtgagttgcaggag
gagtgtgattcgagaggatctttgattttgaagaaatatatggagtataggaaattggct
aaattgtcctctgagattaatgcacaaaacatgaatttggttaatgttcctgaccctaga
gaggttgagttgtatttggaagagatattgaccttgatgcaattaggtgaggattataca
gagtttatggtttcaaagatcaaagggttgagttctgttgatccagaattagttccacga
gctaccaagtcttttagaagtggtagttttagcaaagtagttcaggaggtcactgggttt
tatgtggttttggagggattctttatggttgaaaatgttaggaaagctattgcgatagat
gagcctgtgcctgatgctcttactacctctatggtagatgatgtgttttatgttctgcag
agttgtttgagaagggcaatatccacgtcaagtattagctctgtcattgcaatactgagt
ggtgctagtgctctattgagtaacgaattcaatgatactttgcaacagaaaatgagagaa
ccaaaccttggtgctaagctgtttttgggtggtgttggcgtacaaaagtctgggacagag
attgcaactgcattgaataatattgatgtgagcagtgagtatgtgcagaagctaaaacat
gagattgaagaacaatgcgcacaggtattccctgcatcagcagatagagaaaaggtgaaa
tcttgtttgtcagagttgggtgatatgagcaataccttcaagcaagcccttaatgctggc
atggaacaacttgtggctactgtaacacaacgcatccgtcaagtgttggatagcgtaaca
accattagttatgagttatctgaggcagaatatgctgataatgaggtgaatgacccatgg
gtccagaggcttcttcatgctgtagagacaaatgtttcatggctacagccagtaatgact
gctaacaactatgactcctttgtacatttggtcattgattacattgtgaagaggcttgaa
gtgataatgatgcaaaaaaggtttagtcagcttggaggccttcaacttgacagagatata
agagctctagtaagccatttctccagcatgactcagaggacagttagggataagtttgct
cgactaacccaaatggcaaccattctcaacttagagaaggtgtctgagattctagatttc
tggggtgaaaactcgggacccatgacatggaggttaacccctgctgaggtcaggcgtgtg
ttgggtttgagggttgatttcaaacctgaagccatttctgctcttaagttataa
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