KEGG   Ricinus communis (castor bean): 8285528
Entry
8285528           CDS       T01087                                 
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03420  Nucleotide excision repair
rcu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    8285528
   03460 Fanconi anemia pathway
    8285528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8285528
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     8285528
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC UPF0758_N TMEM51
Other DBs
NCBI-GeneID: 8285528
NCBI-ProteinID: XP_002512344
UniProt: B9RF25
LinkDB
Position
10:12049465..12052490
AA seq 392 aa
MERQEQQEEEERSNRKSNAKKVVIQIPSYQEVIESSQNPKTESLFKPSQTFSQAFSFIKD
SEFYTPPPQSSAVSNNANSIQTTQSVPSPSQSVALTGNYRNSILVSHRQKGNPLLKHIRN
VRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDV
VKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSRLTHA
LTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVS
SHPAVPETSQKDSEPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSKYANTFVK
RTDKSEGENAGETSCSVETGTDNRNPGEGAGS
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggagagacaggaacaacaagaagaagaagaacgtagtaacagaaaatcaaatgccaaa
aaagtagtaatacagataccatcgtaccaagaagttattgaaagttcacaaaatccaaaa
accgaatctttattcaagccatctcaaactttctctcaagctttctctttcatcaaagac
tctgaattttacactcctcctcctcaatccagtgctgtctctaataatgcaaactcaatc
cagaccacccaaagcgtgccttcaccttctcaatctgttgctcttactggtaactatcgc
aactcgatccttgttagccacaggcagaaggggaacccactgcttaaacatatacgaaac
gtgaggtgggcttttgctgatgttgtttgcgactacttgcttggccagaactgctgttct
ctttatttaagtttgcggtatcatctactgcatccagactatctgtattatcgaattaga
gagctccaaaagaattacaagcttcgtgttgttctgtgccatgtcgatgtggaggatgtg
gttaaacctttacttgaagtcactaaaacagctctacttcatgattgtactctattatgt
gcttggagcttggaggaatgtggccgttacttggagacaataaagatgtacgaaaacaag
cctgcagaccttatccagggccaaatggatacagattacttatcacggctaacccatgct
ctcacaactattcgacatgttaacaagactgatgttgttacccttgggtctacctttggg
tctctttctaatatcatggatgcatcgatggaggatctagctcgttgccctggaatagga
gaacgcaaggtgaaacgcttatatgacacttttcacgaaccattcaagcgggttgtttcc
agtcaccctgctgttccagaaacatcacagaaagacagtgaacctgccttggtggatgaa
gttacagaagtagggaagggagaatatgacgagagcaaatggaggaagaaagaacctgag
ttaacagttaaatcagctctatctgccgcattttctaagtatgctaatacatttgttaaa
agaactgataaatcagagggagaaaatgcaggagagacaagctgttccgtggaaacagga
actgataatagaaaccctggggaaggggctggaagttga

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