Ricinus communis (castor bean): 8285842
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Entry
8285842 CDS
T01087
Name
(RefSeq) LOW QUALITY PROTEIN: probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8285842
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
8285842
NCBI-ProteinID:
XP_025014135
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Position
1:complement(6450451..6452458)
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AA seq
388 aa
AA seq
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MMSQSTLKLFTVKFRYDYVDHINQMADGQFDHDQPLLSVDPLVCFFYSSGASTMKPKLIP
YYDSALSRAASYIAHQGSKAIFKENNWDRIVSKLWPNARYVKCVSTGSMKQYYSKLKPYT
GEVMILGGDYFASECPVGINFDIKQPPETTRXVMLPTAAYFEFLPFNXERGSVIGKETVD
FSGDEIGKAYEVVVITYRGFYRYRLGNIVRIVSLRNSSPEVEFLMRTPRTAXVTEKNLMS
AKESFQIVITNTVEAAEIDEYASFLDLELSPKQLKIFLEVKEGCVLVQDEKLKLKESVKA
VKNCSSSLENGLGGLYKVQRDRGEIGPLLITMVKPGSFDRILQMAVENGVPASQYKPPKI
IRNSKIVGILEAADLVTICSDSLNGGDL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcccagtcgacgctcaaacttttcaccgtcaagtttcgttatgattacgtagat
cacatcaatcaaatggctgacggtcaattcgatcacgatcagcccttgctatcagttgac
ccccttgtttgtttcttctacagctccggcgctagtacaatgaagcctaaattgataccg
tattatgattcagctttatcaagagctgcatcctatatagctcaccagggcagtaaggca
atctttaaggaaaacaattgggataggattgtgtccaagttgtggcctaatgctcgttat
gtgaagtgtgtttctactggaagtatgaagcagtactattccaagctcaagccgtataca
ggagaggtaatgattttaggtggagattactttgcatcagaatgtcctgtgggtattaac
tttgatatcaagcaacctccggagacaactcganttgttatgcttccaacggctgcgtac
ttcgagtttcttccattcaatnttgaaagaggtagtgtgattggcaaagaaactgtggat
ttttcaggtgacgaaataggtaaggcatacgaggtggttgtgataacttacagaggattt
tatcgttaccgcttgggtaatattgtgagaattgtcagtttgcgtaattcatctccggaa
gtggagtttctgatgagaactcctagaactgccnntgtaacagagaaaaacttgatgtcc
gcaaaggaaagttttcagattgtgataacaaatactgtggaagcggcagagattgacgag
tatgcaagttttctggacttggaattgagtccaaagcaattgaaaatattcttagaagtt
aaagaggggtgtgtgcttgtgcaggacgagaaacttaaacttaaagaatcagttaaagct
gtaaagaattgtagttcctctcttgagaatgggttgggaggtctatacaaggtgcagagg
gatcgaggtgaaataggtcctctgttaataactatggtaaaacctggtagctttgacagg
atattacaaatggctgtggagaatggagtaccagctagtcaatataaacccccgaagatc
atccgaaatagcaaaatcgttggtattttggaagcagctgatcttgtgactatatgttcg
gactcgttgaatggaggagatctctga
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