Ricinus communis (castor bean): 8285997
Help
Entry
8285997 CDS
T01087
Name
(RefSeq) carbamoyl-phosphate synthase large chain, chloroplastic
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00220
Arginine biosynthesis
rcu00240
Pyrimidine metabolism
rcu00250
Alanine, aspartate and glutamate metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
rcu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
8285997
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
8285997
00220 Arginine biosynthesis
8285997
Enzymes [BR:
rcu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
8285997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
Epimerase
Motif
Other DBs
NCBI-GeneID:
8285997
NCBI-ProteinID:
XP_002526339
UniProt:
B9SK20
LinkDB
All DBs
Position
8:complement(16852317..16858648)
Genome browser
AA seq
1190 aa
AA seq
DB search
MATCLNHCETLSSTSIFPNKSLTLPRLSRRRSFGLFSYKNYNFSSLNLHPWPPRRTTRHL
KRCSSNSVRCSSISDVTVKTLTEAPNVGKRTDIKKIMILGAGPIVIGQACEFDYSGTQAC
KALKEEGYDVILINSNPATIMTDPDLADRTYIAPMTPELVEQVIEKERPDALLPTMGGQT
ALNLAVALAERGTLEKYNVELIGAKLDAIKKAEDRDLFKQAMKNIGLKTPPSGIGTTIDE
CFHIANDIGEFPLIIRPAFTLGGTGGGIAYNIEEFEGICKGGLAESLTSQVLVEKSLLGW
KEYELEVMRDLADNVVIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSIKIIR
EIGVECGGSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYSLD
QIPNDITKKTPASFEPSIDYVVTKIPRFAFEKFPGSQPILTTRMQSVGEAMSIGRTFQES
FQKGVRSLESGYSGWGCAKVKELDWDWDQLKYNLRVPNPDRIYAVYAAMKKGMKVDEIHE
LSLIDKWFLNQLKELVDVEQYLMTRSLADMIKDDFYEIKKRGFSDKQIAFATKSTEKEVR
SKRLSFGVTPAYKRVDTCAAEFEANTPYMYSSYDAECESAPTNKKKVLILGGGPNRIGQG
IEFDYCCCHTSFALQSAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVVNVIDLERP
DGIIVQFGGQTPLKLALPIQQYLDEHKPVSASGAGHVRIWGTSPDSIDAAEDRERFNAIV
KELQIEQPKGGIAKTEADALTIAKDIGYPVVVRPSYVLGGRAMEIVYSDEKLVTYLENAV
KVDPDRPVLIDKYLSDAVEIDVDALADSHGNVVIGGVMEHIEQAGVHSGDSACILPTQTI
SSSCLDTIRSWTMKLAKSLKVCGLMNCQYAITLAGEVFLLEANPRASRTVPFVSKAIGHP
LAKYASLVMSGISLNELGFTKEVIPAHVAVKEVVLPFNKFPGCDVMLGPEMRSTGEGMGI
DFALPIAYAKGQIATGQKLPLSGTAFISLNDLTKPHLEKLANAFLELGFRIISTSGTAHF
LELKGIPVERVLKMHEGRPHAGDMLANGQIQLMVMTSSGDSLDQIDGLQLRRMALAYKVP
IITTVAGALATAEAIKSLRSCPIDMIALQDFFDVEIREESSKHLQSASSL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggctacttgcttaaaccattgtgaaaccctttcttccacctccattttccccaacaaa
tctctcaccttgcctcgtctctcaagacgacgtagttttggcttgttttcctataaaaat
tacaatttctcttctctaaacctccacccatggccacctcgccgtaccacccgccactta
aaacggtgcagcagcaactccgtacggtgcagcagcatctctgatgtaaccgtaaaaacc
ctaacagaagctccaaacgtaggcaaacgcaccgatataaagaagatcatgattctgggt
gcgggtcccattgtaatagggcaagcttgtgagtttgattattcaggtacacaagcatgt
aaagcattgaaagaagaaggatacgacgtcatattgattaattcaaatccagctacaatc
atgaccgacccggatttagcggatagaacttacattgcaccaatgacaccggaattagtg
gagcaagttatcgaaaaggagcgacctgatgctctgttaccaactatgggtggtcaaacg
gcgttgaatttagcggtggctttagctgaaagaggtacattggaaaaatataatgttgaa
ttaataggagctaaacttgacgctattaaaaaagctgaagatagagatttgtttaaacaa
gctatgaaaaatattggtcttaaaacgccaccatctggtattggtactactattgatgaa
tgctttcatatcgctaatgatattggtgagtttccgttgattattaggccggcatttact
ttaggtggaactggaggcggcattgcatataatattgaagaattcgagggaatttgtaaa
ggagggttagcggagagtttaacttctcaagttttggttgagaagtcattattaggatgg
aaagaatatgaattggaagtaatgcgtgatttagctgataatgttgttataatttgttca
attgagaattttgatccgatgggagtgcatactggtgattcgattacggttgctccagct
cagactttaactgataaggagtaccagagattgagggattattcaattaagattatcaga
gagattggtgtcgaatgtggtgggtctaatgtgcagttcgctgttaatcctgttgatggt
gaggttatgattattgaaatgaaccctagggtttcaaggtcttccgctttggcttctaag
gctactggttttcctatagcaaaaatggctgctaagttgtctgttgggtattcattggat
caaattcctaatgatattacgaagaagacacctgctagtttcgaaccttctattgactat
gtggtgaccaagatcccgcgatttgcatttgagaaattccccggttctcagccaattctg
acaaccaggatgcaatctgttggtgaggccatgtcaattggtcgaacttttcaagagtcc
tttcagaaaggagttcggtcactggagtctggttactcaggatggggttgtgcaaaagtt
aaggaacttgactgggactgggaccaactgaagtacaacctccgagttccaaacccagat
cgtatttatgctgtttatgctgcaatgaagaaagggatgaaagttgatgaaatccatgaa
ctgagcttaattgacaagtggttccttaatcagcttaaagagttggtggatgtggaacaa
tatctaatgactcggagcttggctgatatgatcaaggatgacttctacgagattaaaaaa
cgcggtttcagtgataaacagatagcgtttgctactaaatcaacagagaaggaagttcgt
tcaaaacgattgtcttttggagttactccagcatataagcgggtagacacctgtgctgct
gagtttgaggctaatactccttatatgtactcctcctatgatgctgagtgtgaatcagct
cccaccaacaagaaaaaggttttgattttaggtggaggaccaaatcgtataggacaaggg
attgagtttgattactgctgttgccatacctcttttgctctccagagtgcaggatatgaa
acaattatgatgaattcaaatcctgaaaccgtatcaactgattatgatacaagtgaccgt
ctttatttcgagcccttgacagtagaagatgttgtgaatgtaattgatctggaaaggcct
gatggcattattgtacagttcggaggtcaaacacccctgaagcttgctctgcccattcag
caatacctagatgaacataagcctgtttctgccagtggagctgggcatgttcgcatatgg
ggtacatcaccagactctattgatgctgctgaggacagagagaggttcaatgcaattgtt
aaagagttgcagattgagcagccaaaaggaggcattgccaagaccgaagctgatgcactt
accattgcaaaagacataggttaccctgttgtagtccgtccttcatatgtgttgggtggc
cgtgcaatggagattgtatatagtgatgaaaagcttgtgacgtatcttgaaaatgctgtc
aaggtggaccctgaccgacctgttttgattgataaatatttgtccgatgctgttgagatt
gatgtagatgcacttgcagattcacatggtaatgttgtgattggtggggtaatggaacat
atcgagcaggctggggtacattctggtgactcagcttgcatccttcccacacaaactatc
tcttcttcttgtctggacacaataaggtcatggactatgaaattggcaaagagtctaaaa
gtttgtggactcatgaattgccagtatgctatcacattggctggggaggtttttctgctg
gaggcaaatcctcgtgcttctcgtactgtcccatttgtctccaaggcaattggtcatcca
ctggctaaatatgcttctcttgttatgtctggcatatcacttaatgagctaggattcacc
aaagaggtgattccagcacatgtggctgtcaaggaagtagttcttccatttaataagttc
ccaggctgtgatgtgatgttaggacctgaaatgaggagcactggtgagggtatgggcatt
gattttgcacttcctattgcatatgctaaaggtcaaatcgctactgggcagaaactgccg
ctttctggcactgcgttcatcagtttgaatgacttaacgaaaccccaccttgaaaaactt
gcgaatgcctttttagaacttgggtttaggattatttcaacttcagggacagctcatttt
cttgagttgaaaggtatccctgtggagcgagtactgaagatgcatgaagggcggccgcat
gctggtgatatgcttgctaatgggcaaatccagttgatggtgatgacaagttctggtgat
tcacttgatcaaattgatggcctgcaactgaggaggatggctcttgcctataaggttcct
ataataacaacagtagctggtgctttggcaactgcagaagctataaagagcttaagatcc
tgcccgattgatatgatagcccttcaggacttctttgatgttgagatacgtgaagaaagt
agtaaacacttgcagtcagcttcttctctatga
DBGET
integrated database retrieval system
