Ricinus communis (castor bean): 8286346
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Entry
8286346 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8286346 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8286346
Membrane trafficking [BR:
rcu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
8286346
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
8286346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
TFIIIC_delta
WD40_Prp19
Synaptobrevin
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
8286346
NCBI-ProteinID:
XP_015582667
LinkDB
All DBs
Position
10:complement(6231333..6245974)
Genome browser
AA seq
1125 aa
AA seq
DB search
MIAAKRLIQKAVHHHHHQQLDVQRGNLKSTDLDLHISVHYGVPSTASLLAFDSIQRLLAI
ATLDGRIKVIGGDGIEGIFISPKQLPYKNLEFLQNRGFLVSISNENDIEVWNLKSRCLKC
CLQWEKNITAFSVISGSYLMYIGDEYGLMSVVKYDADNAKLLRLPYNIPSNQLNEVAGFP
SSDHQPIVGLLPHPCSSGNRVLIAYENGLMVLWDVSEARILFVGGSKDLQLKDGNVDSQS
GPHTNLQDNASNDQLQDKEISALCWASSNGSILAVGYVDGDILFWKTSTDSSIRGQQNES
SSSNIVKLRLSSAERRLPVIVLHWSASNRSSNGCDGHLFIYGGDEIGAEEVLTVLTLEWS
SRTETLRCTGRADITLTGSFADMILSPSAGSTGGSHKAAVFVLTNPGKLHLYDEASLSVL
LSQQEKERSVSAVEFPAMIPMADPSLTLAKFTVLPACTNLSKVLSEMALVKKQGTTLAPT
GGIKWPLTGGVPAYLSSANKSSIERLYIAGYEDGSVRFWNASCPVLSPICVIEGKVEGVE
VAGFSSPVSSLDFCPLTLTLAVGNKHGVVRIYNLSSNSTEKNFHLVTQNKNEIHILPQGK
RPHCRAVFSLLTSPIHVLQFPSSGEKLAIGFEYGRVAVLDMCSLTVLFFTDCLSSSSSPV
ISLTWLKYESIGSLLKTPKHSETNTPMNPEDEVIFSSTKDGFLNIINGCSGSMISSSPWH
LKKKSYPKKKIIAISMFVIEDSSPVSVSTNGKQAEESFQDMATHSVEPRDKTISTDTGSH
SSKHASSAGATLTTGRLMDPLILLCCEDSLSLYSAKNVIQGNSKSISKVKHTNPCCWVST
FKKDEKVCGLILLFQTGVIEIRSFLDFELVKESSLMSILRWNFKANMEKMITSDNEHIAL
ANGCELAFISLLYDETGLRIPESFPCLHDDVLAAAADAAISFSSDQKKKQGTKPGILGGI
VKGFKSEKIERTLDFTPTAQSNFRHLEDIFLKSPFPGLLPTGTDNQELELNIDDIEIDES
PLATGTSSQEVKSRKDKGTEREQLLGKADDMQPRLRTPEEIIAQYRKVGDASSVAAHARN
KLVERQEKLERISRRTAELQNGAEDFASLADELVKAMENRKWWQI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgctaagcgactgatacagaaagctgtacaccaccaccaccaccagcagctg
gacgtgcaacgtggcaacttgaaatcgacggacttggatttacatatttctgttcactac
ggtgtcccttctacggcgtcgcttcttgcttttgactctattcagcgtctattagccatt
gcaacactagatgggcgaattaaagttattggtggcgatggaattgaaggaatttttata
tccccgaagcaattgccttataaaaacttagagtttctgcaaaaccgtggtttcttagtt
agcatttcaaatgagaatgatattgaggtgtggaatctgaagagcagatgcctgaaatgt
tgtttgcaatgggaaaaaaatattactgcattctctgtaatcagtggctcctacctcatg
tatattggagatgaatatggtttgatgtctgtagtgaagtatgacgctgataatgctaag
cttttacggttgccatataacataccttcaaaccagttaaatgaagtggctggatttcca
tcatctgatcaccaacctattgtgggacttcttcctcatccatgttcttctggaaataga
gtgctgattgcatatgaaaatggactgatggttctttgggatgtttctgaagctcggatt
ctttttgttggaggtagtaaggatcttcaattgaaggatggaaatgttgattcccaaagt
gggccacatactaatcttcaagacaacgcatctaacgatcaattacaagacaaagagata
agtgctctttgctgggcatcttccaatgggtccattcttgcagttggatatgtagatgga
gatatcttgttttggaaaacatcaactgattcctcaattagaggtcaacaaaatgaatcc
tcaagcagcaatattgttaagctgcgattatcatctgctgagaggagactacctgttatt
gtcttacactggtctgccagcaatagatctagtaatggttgtgatggtcatctgtttatt
tatggtggtgatgaaataggagctgaagaagttctgacggttttaacactagaatggtca
tctaggacagagacattaagatgtacaggtcgtgctgacatcacactcactggctctttt
gctgacatgattttgtctccaagtgctgggtcaacagggggtagtcacaaagctgctgta
tttgtattgacaaatcccggaaagttgcatctttatgatgaagctagcttatctgtcttg
ttatctcagcaagagaaggaaagatctgtctctgctgtagagtttcctgcaatgatacct
atggctgatccatccttgactcttgcaaaattcactgtgctgcctgcatgcacaaacttg
tcaaaagtcctatctgagatggccttagttaaaaaacaaggcaccacccttgccccaacc
ggtggtattaagtggcctttgactgggggtgtacctgcctatttgtcctcggcaaataaa
agtagtattgaaagattgtatatagcaggttatgaagacggatctgttcggttttggaat
gcctcatgtcctgtcctatcacctatttgtgttatagaaggcaaggtggaaggtgtagaa
gttgctggctttagttctccggtatcaagtctggacttctgtcctcttaccttaactttg
gcagttggcaataagcatggggtggttcgtatttataacctcagcagcaactcaactgag
aagaattttcaccttgtgacacagaataaaaatgaaattcacattctgcctcaagggaaa
agacctcactgtagagcggttttttctctccttacatccccgattcatgtactacagttt
ccaagttctggagaaaaacttgccataggttttgaatacggtcgggtggcagtccttgac
atgtgttcattaacagttctgttcttcacggactgtctttctagctctagctctccagtc
atttcactgacctggttgaaatatgaaagcattggtagccttttaaaaacaccaaagcat
tcagaaactaatactcctatgaatcctgaagatgaagtcattttttcctcaaccaaggat
ggcttccttaacattattaatggttgtagtggtagcatgatcagctctagtccctggcac
ctgaaaaagaaatcatatccgaaaaagaaaataattgctatttcgatgtttgttatagag
gacagtagtccagtctctgtctcgacaaatggaaagcaggcagaggagtctttccaggat
atggctacacatagtgttgagccaagggataaaactatttcaacagacaccggctcacat
agcagcaagcacgcttcctctgcaggtgccacgctcaccacaggcagattaatggatcca
cttattctgctatgttgtgaagattcattgagcttgtactctgcaaagaatgtgattcag
ggaaacagtaaatccatttccaaagtgaaacacacaaacccttgctgttgggtttcaact
tttaagaaagatgaaaaagtttgtggactgatcttgctgtttcagactggagtaattgaa
atcagatcctttctggattttgaattggtgaaagaaagctccttaatgtcaattcttagg
tggaacttcaaagcaaacatggagaaaatgattacttcggacaatgagcacattgcattg
gcaaatggatgcgagttggcttttatctcgctactatatgatgaaactggtttaaggatc
ccagagtcatttccgtgtcttcatgatgatgtccttgctgccgctgcagatgctgccatt
agtttctcatcagaccagaagaaaaagcagggtactaaacccggaattctaggtggtatt
gtcaaaggctttaagtcagaaaaaatagagcggactctggattttactccaacagcgcag
tccaattttagacacctagaggacattttcttgaagtccccattcccaggcttacttcca
acaggcactgataatcaggaattggagcttaatatagatgatattgagatagatgaatct
cctctagccacaggaacttcatcacaggaagtgaaaagcagaaaagataagggtacggaa
agggaacagttattgggcaaggctgatgatatgcaacccagacttaggacacctgaagaa
attatagctcaatatagaaaagttggggatgcctcgtcggttgctgcgcatgcaagaaac
aagcttgtggaaaggcaagaaaagctggagagaatcagtaggcgcactgcagagctgcaa
aacggagctgaagactttgcatcattagcggatgagctagttaaggcaatggagaataga
aaatggtggcaaatatga
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