Ricinus communis (castor bean): 8286380
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Entry
8286380 CDS
T01087
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8286380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8286380
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
8286380
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
8286380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
8286380
NCBI-ProteinID:
XP_015578273
UniProt:
A0ACL1FZJ8
LinkDB
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Position
1:complement(11641326..11647496)
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AA seq
762 aa
AA seq
DB search
MGSPGLSTRNNGQQQLRLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSRE
EVLGRLDQIVKHWVKVISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPR
HATREEDFFGELHRMLSEMPEVTELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPED
LDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVS
GFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWD
PRRNPKDRYHLMPIITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKADWNTL
FESFSFFDAYKNYLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGE
FTDKSRPLHCSYFMGLQRKQGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHV
KRRNIPSFVFPGGIRPSRPSKTTWDSKRSSAEKSGEGKGVSDGSDDKGKRKRIDDNVANA
TKIAKPDSTSPLSGEVNNGSPSAGTVSLLLTSTNAVGEPRDEPVENNLTDDFSNSKDLTG
FYAHNGELNPPNKVLLGINEAPSKVAEKLAIETIMSGPYVTNQALPQELDELEDDFECRT
QVKDFGAGANTKDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCPNGGLEE
LEPAELVAPFFSGISSAAPVAQRKPLIRLSFTSLGKANGRST
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggggagcccaggattaagcactcggaataatgggcagcagcaactgcgattaggcatt
acagaccccatatccttgggtggacctacagagtatgatttgataaagtcgcgcgaactt
gaaaagtttttgcaagacatgggactgtatgagagtcgggaggagtctgtgagtagagag
gaagtgcttgggagactagaccagattgtgaagcattgggtcaaagtgattagccgcgca
aaagggttgaatgagcaactagtgcaagaagcaaatgctaagattttcacctttggttct
tatcggcttggcgtgcatggccctggtgcagatatagacacactctgtgtgggaccaaga
catgcaacacgagaagaagatttttttggcgagttacataggatgctttctgagatgcct
gaagtgacagagttgcatcctgtgcctgatgcacatgttccagtgttgaaattcaagttt
aagggcgtttctatagatcttctttatgcaaaactgtctctttgggtgattcctgaggat
ttagatatttcacaggactcaatactacaaaatgcagatgaacaaactgtacgcagtctt
aatggttgtagagttactgatcagattttgcgtttggtgccaaatatccagaatttccgc
acaacattgcgatgcatgaggttctgggcaaaacgccgtggtgtttattcaaatgtttca
gggtttctaggtggtataaattgggcattacttgttgctcgcatatgccagctatttccc
aatgcactgccaaatatgctagtgtctcggttcttcagggtatatactcagtggcgttgg
ccaaatccagtgatgctctgtgctattgaagaaggatcccttggtcttcaagtttgggat
cctagaagaaatccaaaggaccggtatcatttgatgcctatcattactcctgcttatcct
tccatgaattctagttataatgtatcggccagcactttgcgcataatgtccgaagagttt
caaagggggaatgaaatttgtgaggctatggaggcaagtaaagctgattggaatactctt
ttcgaatctttttcattctttgatgcatacaaaaactatctacagatcgatattggtgca
gaaaatgaagatgatttaagaaagtggaaagggtgggttgaatctcgtctccgtcagctc
acattgaagattgagaggcacacattcaatatgcttcaatgccatccacacccaggggaa
tttacagacaaatctagacctctgcattgttcttactttatgggtttgcaacgtaaacaa
ggggttcctgcaaatgaaggggaacagtttgatatcaggataactgttgaggaatttaaa
atttctgtgaacatgtatacctcatggaagcctggaatggagatccatgtaacacatgta
aagcgaagaaatattcctagttttgtttttcctggtggtatacgcccttctcgtccatca
aaaacaacttgggatagcaagcgaagttcagcagaaaagtcaggtgaaggtaaaggggtt
tcagatggatcagatgacaaagggaagagaaagcgaattgatgataatgtagcaaatgcg
acaaaaattgccaagcctgattctacttctcccttgagtggggaagttaataatggaagc
ccttctgctggcactgtttctctactccttacaagtacaaatgcagtaggggaaccaagg
gatgaaccagttgagaataacttaacagatgactttagtaattccaaagatttaactggg
ttttatgctcacaatggtgagctaaatccaccaaataaagttttgttaggtatcaatgaa
gcaccatctaaggtagctgagaagctagcaattgagacaataatgtccgggccttatgtt
accaaccaagctttgccacaagaacttgatgagcttgaagatgactttgaatgcagaact
caggttaaagactttggggctggggctaatacaaaagacacaaatgacagcccaatagaa
tcgtcatcagcaagtacaactgctaaaacattgccaaatgcacctgtcgccgcaccagta
atatccagcaatggaactgatccatccactgctttgtgtcccaatggcggtttggaggag
cttgagcctgctgaacttgtggcaccattttttagcgggatctcgtctgcagcacctgtg
gcgcaacgaaaaccacttatcaggttgagtttcacttctttaggcaaagccaatggcaga
agcacataa
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