Ricinus communis (castor bean): 8286493
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Entry
8286493 CDS
T01087
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03030
DNA replication
rcu03410
Base excision repair
rcu03420
Nucleotide excision repair
rcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8286493
03410 Base excision repair
8286493
03420 Nucleotide excision repair
8286493
03430 Mismatch repair
8286493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8286493
03036 Chromosome and associated proteins [BR:
rcu03036
]
8286493
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8286493
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
8286493
DNA Replication Termination Factors
ELG1-RFC complex
8286493
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
8286493
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
8286493
Check point factors
HRAD17(Rad24)-RFC complex
8286493
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
RsgA_GTPase
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA_2
DUF815
ABC_tran
RuvB_N
AAA_22
nSTAND6
AAA_lid_RFC1
AAA_29
AAA_23
T2SSE
AAA_24
AAA_16
nSTAND3
TsaE
Motif
Other DBs
NCBI-GeneID:
8286493
NCBI-ProteinID:
XP_002525685
UniProt:
A0ACK6BG61
LinkDB
All DBs
Position
10:9619588..9623648
Genome browser
AA seq
355 aa
AA seq
DB search
MLWVDKYRPKTLDQIMVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
PSAEKVKVENKTWKIDAGSRTIDVELTTLSSSHHIEMSPGDVGFQDRYIVQEVIKDMAKN
RPLVDAKGRKGYKILVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRS
RCLNVRISAPSEEQIVKVLEFIGKKEGLQLPHGFAARVAEKSNRSLRRAVLSFETCRVQQ
YPFTSNQPIPPMDWEEYVSEIASDIMREQSPKKLFQVRGKLYELLINCIPPDIILKRLVN
ELLKKLDEELKHEISHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIATFG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtagacaagtacagacccaaaaccctagaccagattatggttcatgaagac
attgcccaaaacctcaagaaacttgttactgaacaagattgcccgcatttgctattctat
ggcccctctggttctgggaagaaaaccctaatcatggcccttcttcggcagatttttggt
cccagtgctgaaaaggtgaaggtggaaaacaagacatggaaaattgacgctggaagtaga
actattgatgtggagcttactacattgtcaagttcgcatcacattgagatgagtcctggt
gatgtaggcttccaggatagatacatagtacaagaggtaatcaaagacatggctaagaat
cgtcctctagttgacgcgaaagggagaaaaggatataaaatattagtgctcaatgaggtt
gacaagctttcaagagaggcacagcattctctacgtagaactatggagaagtacagtgct
tactgccggcttattctttgttgcaacagttcttcaaaggttactgaagcaattcggtct
cgttgtctgaatgtgcgaataagtgcaccttcagaggaacagattgttaaggtattagag
ttcattggtaagaaagaaggcctgcaacttccacatggatttgctgctcgtgtagctgaa
aaatcaaatcgaagtttaaggagagccgtactttcttttgagacttgccgagtccaacag
tatcctttcacaagtaatcagccaatacctccaatggattgggaggaatatgtttctgaa
atagcatctgacataatgagagagcagagtcctaaaaagctttttcaggtccgagggaag
ttgtatgaactacttattaattgtattcctcctgatattattctgaagaggctggtcaat
gaattattgaagaaattggatgaggaattaaagcatgagatctcccattgggctgcatat
tatgaacataggatgcgtctcggacagaaagccatatttcaccttgaagcttttgtggcc
aagttcatgagtatatacaaggctttcctgattgctacatttggctga
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