KEGG   Ricinus communis (castor bean): 8286493
Entry
8286493           CDS       T01087                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03030  DNA replication
rcu03410  Base excision repair
rcu03420  Nucleotide excision repair
rcu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    8286493
   03410 Base excision repair
    8286493
   03420 Nucleotide excision repair
    8286493
   03430 Mismatch repair
    8286493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcu03032]
    8286493
   03036 Chromosome and associated proteins [BR:rcu03036]
    8286493
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8286493
DNA replication proteins [BR:rcu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    8286493
  DNA Replication Termination Factors
   ELG1-RFC complex
    8286493
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    8286493
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     8286493
  Check point factors
   HRAD17(Rad24)-RFC complex
    8286493
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 RsgA_GTPase Sigma54_activ_2 Mg_chelatase AAA_5 AAA_2 DUF815 ABC_tran RuvB_N AAA_22 nSTAND6 AAA_lid_RFC1 AAA_29 AAA_23 T2SSE AAA_24 AAA_16 nSTAND3 TsaE
Other DBs
NCBI-GeneID: 8286493
NCBI-ProteinID: XP_002525685
UniProt: A0ACK6BG61
LinkDB
Position
10:9619588..9623648
AA seq 355 aa
MLWVDKYRPKTLDQIMVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
PSAEKVKVENKTWKIDAGSRTIDVELTTLSSSHHIEMSPGDVGFQDRYIVQEVIKDMAKN
RPLVDAKGRKGYKILVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRS
RCLNVRISAPSEEQIVKVLEFIGKKEGLQLPHGFAARVAEKSNRSLRRAVLSFETCRVQQ
YPFTSNQPIPPMDWEEYVSEIASDIMREQSPKKLFQVRGKLYELLINCIPPDIILKRLVN
ELLKKLDEELKHEISHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIATFG
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgttgtgggtagacaagtacagacccaaaaccctagaccagattatggttcatgaagac
attgcccaaaacctcaagaaacttgttactgaacaagattgcccgcatttgctattctat
ggcccctctggttctgggaagaaaaccctaatcatggcccttcttcggcagatttttggt
cccagtgctgaaaaggtgaaggtggaaaacaagacatggaaaattgacgctggaagtaga
actattgatgtggagcttactacattgtcaagttcgcatcacattgagatgagtcctggt
gatgtaggcttccaggatagatacatagtacaagaggtaatcaaagacatggctaagaat
cgtcctctagttgacgcgaaagggagaaaaggatataaaatattagtgctcaatgaggtt
gacaagctttcaagagaggcacagcattctctacgtagaactatggagaagtacagtgct
tactgccggcttattctttgttgcaacagttcttcaaaggttactgaagcaattcggtct
cgttgtctgaatgtgcgaataagtgcaccttcagaggaacagattgttaaggtattagag
ttcattggtaagaaagaaggcctgcaacttccacatggatttgctgctcgtgtagctgaa
aaatcaaatcgaagtttaaggagagccgtactttcttttgagacttgccgagtccaacag
tatcctttcacaagtaatcagccaatacctccaatggattgggaggaatatgtttctgaa
atagcatctgacataatgagagagcagagtcctaaaaagctttttcaggtccgagggaag
ttgtatgaactacttattaattgtattcctcctgatattattctgaagaggctggtcaat
gaattattgaagaaattggatgaggaattaaagcatgagatctcccattgggctgcatat
tatgaacataggatgcgtctcggacagaaagccatatttcaccttgaagcttttgtggcc
aagttcatgagtatatacaaggctttcctgattgctacatttggctga

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