Ricinus communis (castor bean): 8286754
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Entry
8286754 CDS
T01087
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8286754
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
8286754
Surveillance factors
Other surveillance factors
8286754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
8286754
NCBI-ProteinID:
XP_015572188
LinkDB
All DBs
Position
7:complement(28668784..28677604)
Genome browser
AA seq
1621 aa
AA seq
DB search
MADRKLDLPDDLLSSKPSDHSFNPKVEASGNDEEKIHVALHDEAKDQLASESSIPLSPQW
LYSKPSETKMDMRTLTSVALGNTNDASQKEGWRLDGTDDKKDWRRIATENESSRRWREEE
RETGLLGARRDRRKTERRVDSVSIRETMENRVLPSSERWHDGTNRNSGHEARRDSKWSSR
WGPDDKEKDSRAERRTDVDKEKEDVHNDNQSSIVSNRSVSERESDSRDKWRPRHRMEVHS
AGSTSYRAAPGFGNERGRAEGSNMGFALGRGSANAISRGSSASFTTASQSYKSGSVIGKP
NFTADKFCYPRGKLLDIYRQHKLDSSFAAMPEEMEESLPLTEDGVIEPLAFVPPDAEEES
ILNGIWKGKITSSGVPYNSFRKGRPSESVSGVGEYESNEEKLGILLSEPFDVTADPFQDA
ASNGAYHIDDNSSLWNHDSHLNVLNEKEVDHEEGNKVTADEVTATFLKDDGVSSAIEIST
SFNVSSQLAIGENGQMMNSALIRHFRPDDFKSASSFDVDTKLPDDSNSLFVLPTSDQDHS
STISHLASKNEAKDLERVISPEDLYFYYVDPHGTTQGPFLGADIILWFEEGYFGTDLPVR
LADAPEGTPFQSLGEVMPRLKMGAGFPSSELEQSGALGGKLEPDLPATLVPENTDSSAVN
DLCQPLSDFSSLSIQHAQSRVSEPENPLQLSHSEDQSFHDFVAQDEEIVFPGRPGSSGYP
TTHSSWSAPDSLANSNGLPSLPNELSEPGLPYHRDNKLHPFGLFWSELEGSQARQTEPSD
LSSSVGRSAPYAAINDPASVAEKWADVYRQDMHSVPSSFQEATAAHRLSLVEQEPNHLDL
ADQLMSRKFQQQQLQHRNMLSSHSHLNESLLEHVPAQNLIHHQQLANHPVPDLEHLLALQ
MQQQQLQQQQLQQQRQLQLQQHQLQQQQQFHQQQKLLQERQQSQARQVLLEQLLHGQMPD
PGLSQSRAIRDQVLLEQQLLHELQQRSHHPQRHLVPSMEQLTRAKFCQTPQQDQQRDIYE
LLSRAQHGKMQSLEHQILQEQLQARQLPMGLRQRMNMEEERHIDSLWPVNENDHFLRSIA
GNPQAHSSGISALDFYQRQQRTPHEDQLSHLERNLSFQDRLRQGIYEPGSMPFERSLSLP
AGASGMNMDIVNAMAHAHGLDMQELSTRMQSAGQVGTLSSGSHPHNPHHPLVPNQFHAPA
LDAIGGRWPESSGPLANDWMESRMQQVHINAERQKRESDSKMAAEDSSLWMSDGSNDDKS
RRLLMELLHQKSGHQTADSLQPSDGLSLDKRLPSGLYTGSSSSDHPFGVVSDQEASLNNS
FAIGSYGSNACEVAEISSAGEQGNNFGGTEKLPFRSESGATYERHSSLLGISENPQAVLN
DLSFIEKLSANRGYMDVEGRKYGAKSQGMTKGPASEIHNGIAEQAHLATTDHGEVPANAL
SRHSSLSVPNFYDDKIGPQNSFGEDIAINQVPSLPKGQENVLLRRPPVARVSSSQEGLSE
LVSDTAIRGKSSTVVEGANPVNQSTDMASGKKDARFRRTSSCGDADVSEPSFIDMLKSNA
KKTTAPEVHMTTAGSESSEGTQGGRSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIE
D
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgcaagctcgatctgcccgatgatctcctctcctctaaaccctccgatcac
tcctttaaccctaaagttgaagcttctggaaatgacgaggaaaagattcatgtggcattg
catgacgaggcaaaagatcaattggcatctgaaagcagcattccgctgtctcctcagtgg
ctttatagcaaaccaagtgagaccaagatggacatgcgcactttaacttcagtagctctt
ggaaataccaatgatgcaagccagaaggaaggttggcgtttagatggaactgatgacaaa
aaagattggagaaggatagctactgagaatgaaagcagccgccgctggcgtgaagaggaa
agggaaactggcttacttggtgctcgaagagatcgtaggaaaacagaacgtcgtgttgac
agtgtttcaattagagaaacaatggagaatagagttttgccttcctctgaaaggtggcac
gatggcaccaaccgaaactctgggcatgaagcacgtcgagatagcaaatggtcttctagg
tggggtcctgatgacaaagaaaaggattcccgagctgagagaagaacagatgtggataaa
gagaaagaagatgttcataatgacaatcaatcatctattgttagcaaccgttctgtttct
gaacgtgagtcagattctcgtgataagtggagaccgcggcacagaatggaggttcattct
gcaggatccacttcctaccgtgctgcacctggatttggaaatgagagagggcgggccgaa
ggttcaaatatggggtttgctctaggacgaggaagtgcaaatgctattagtaggggctca
tctgcaagtttcactactgcttctcagtcatacaagagtggcagtgtcattggcaagcca
aacttcacagcggataaattttgctacccaaggggcaagcttctcgacatttatcgtcag
cataagcttgactcatcatttgctgcaatgcctgaggaaatggaggaatctttgccttta
actgaagatggtgttattgaaccattggcttttgttcctcctgatgctgaggaagagtct
atactcaatggcatatggaaggggaagatcacaagtagtggagtgccttacaattcattt
aggaaagggaggccttctgaaagtgtttcaggtgttggagagtatgaatccaatgaagaa
aaactgggtatccttctgtccgagccctttgatgtgactgctgatccgtttcaagacgct
gcaagcaacggggcatatcatatcgatgacaatagttccctatggaaccatgattcacat
ttaaatgtgttaaatgaaaaagaggtggatcatgaagaaggaaacaaggttactgctgat
gaagtcactgccacattcttgaaagatgatggtgtttcaagtgcaatagagatcagcact
tctttcaatgtcagttctcagcttgctattggcgaaaatgggcagatgatgaactctgct
ttgattagacattttcgtcctgatgattttaagtctgcctcttcttttgatgtcgacact
aagcttcctgatgattcaaattctctgttcgttttacccacttctgatcaagatcatagt
agcaccatatcacacttggcgagtaaaaatgaagcaaaagaccttgaaagggttatttca
cctgaggacttgtatttctattacgttgatcctcatgggactactcaaggaccatttctt
ggagctgatattatattgtggtttgaagaaggttattttgggacagacttgccagtccgc
ttggcagatgctcctgaaggcacacctttccaaagtttaggtgaggtcatgccacgcctt
aagatgggagcaggttttcctagttctgaactggagcagtctggtgctttaggtggaaag
ctggagcctgatttacctgctactttagttccagaaaatactgattcatctgcagtaaat
gacctgtgccagccgttgtctgacttcagttccctctcaattcagcatgctcagtcgaga
gtatctgagcctgagaatccgctgcaattatcacactcagaggaccaaagttttcatgat
tttgttgcacaagatgaagaaattgtttttcctggaagaccagggagtagtggttatcct
accacacattcatcttggagtgctcctgattctttggcaaattcaaatggtctcccatct
cttccaaatgaattatctgaacctggtttaccttaccacagagataacaaattgcaccct
tttggtttattctggtctgagcttgaaggctctcaagctagacaaactgagccatctgat
ttatcttccagtgttggaaggtctgccccgtatgctgctataaatgatccagcttctgtt
gcagagaaatgggctgatgtgtatagacaagatatgcattctgtccccagctcatttcaa
gaagccactgcagctcaccgtctgtcacttgttgaacaagagcctaatcatcttgattta
gctgatcagcttatgtcacgaaaatttcagcagcagcagctccagcatagaaatatgctg
tcatctcattcacatttaaatgagtcacttctagaacatgtgccagcccaaaatcttatt
caccatcaacagttggcaaaccatcctgtgccagatctggaacatcttttggcacttcag
atgcagcaacagcagctacaacagcagcagctacaacaacagcggcaacttcagctccaa
cagcatcagttacagcaacagcagcagttccatcaacagcaaaagcttttgcaggaacga
cagcagtcacaagctcggcaggtgcttctggaacagttgctgcatggtcagatgcctgat
cctggcctctcacagtcccgcgccattcgtgatcaagttttgttggagcagcaacttctt
catgagctgcaacaacggtcccatcacccacagaggcatcttgttccatctatggagcag
cttactcgggcaaaattttgtcagacaccacagcaagatcagcagagagatatttatgaa
ctattatcacgtgcacaacatggaaaaatgcaatctctagaacatcaaattcttcaagaa
cagcttcaggcaaggcagttgccaatgggattgagacagcggatgaatatggaagaagag
aggcacattgattccctatggccagttaatgaaaatgatcacttccttaggagtattgct
ggtaatccccaagctcactcttcaggaataagcgcgttagatttttatcagcggcagcag
aggacaccacatgaggaccagctgagtcaccttgagcgaaatctttcatttcaagataga
ttgcggcaaggaatttatgagcctggttcaatgccatttgagaggtctctctctttgcct
gctggtgcttcaggaatgaatatggatattgtaaatgctatggctcatgctcatgggtta
gatatgcaggagttgagtacacgaatgcagtctgctggtcaagtaggaactttatcctct
ggcagccatcctcacaatcctcatcaccccttagttcctaaccaattccatgctccagcc
ctggatgcaattgggggccgctggccagaaagcagtgggccactagcaaatgactggatg
gaatctcgaatgcaacaagtgcacatcaatgccgagcggcagaaaagggagtctgactct
aaaatggctgctgaagactcgagtctttggatgtcagatggatcaaatgatgacaaatcc
aggcgattgttaatggaattgctacatcagaagtcaggtcaccaaactgctgattctcta
cagccaagtgatgggttatctttggacaagaggttgccatcaggcctctacactggatcg
agctcttcggaccaccctttcggtgttgtatcagaccaagaagccagcctgaacaactca
tttgcaatagggtcttatggttctaatgcttgtgaagtggcagagatttcttcagctggt
gaacagggcaataattttgggggcacagaaaaattaccatttagatccgaatctggagca
acatacgagaggcattcatcgttgttaggcattagtgagaatccccaagctgttctcaac
gatttgagcttcattgagaagctctctgccaatcgaggatatatggatgtagaagggagg
aagtatggagccaaaagccagggtatgacaaagggtccagcttctgagattcataatggc
atagctgagcaagcgcatttggctactactgatcatggagaggttccggcaaatgcgctt
agcaggcactcttctctcagtgttcctaacttttatgatgacaagattggaccacaaaac
tcattcggtgaagatattgctataaatcaggtaccatcactacctaaaggacaagagaat
gtattgttgaggcgaccgcctgttgctcgtgtctcatcatcccaagaaggcctgtctgag
ctggtatcagatacagctattagggggaaaagttcaactgttgttgaaggggcaaatcca
gtgaaccagagcacagatatggcatctggcaagaaggatgcgcgtttccggcggacctca
tcttgtggagatgctgatgtgtcagagccatcatttatagacatgcttaaaagtaatgcc
aagaagaccactgctccagaggtccacatgacaactgcagggtcagaatcatcggaagga
acacaagggggccgaagtggcaaaaagaaaggaaagaaaggaaggcaaattgatcccgct
ctccttggttttaaagtaacaagcaaccggatcatgatgggtgaaatccaacggattgag
gattag
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integrated database retrieval system
