Ricinus communis (castor bean): 8286769
Help
Entry
8286769 CDS
T01087
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00600
Sphingolipid metabolism
rcu01100
Metabolic pathways
Module
rcu_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
8286769
Enzymes [BR:
rcu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
8286769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
8286769
NCBI-ProteinID:
XP_002514887
UniProt:
B9RMB8
LinkDB
All DBs
Position
7:28578293..28584200
Genome browser
AA seq
541 aa
AA seq
DB search
MEMDSVKELLIQFRVTANSFLSEYEPLALVLAPLLTLLLARILHSLFRVFYENGLKSTLF
GFLMASIKLVPGVKSYIDAEKQKVVDKLQSGSKSKREGWRVELPMEGLGTEIIEKMKEEK
RNDAVWQGKCSGTVYIGGSESEGHFSIINEACSMFAHTNPLHLDVFQSIARFEAEVVAMT
ASLLGSKEKASGGEICGNMTSGGTESILLAVKSSRDYMKVKKGITRPEMIIPESAHSAYD
KAAQYFNIKLWRVPVNKEFQADAKAIRRHINRNTVLIVGSAPGFPHGIIDPIEELGELAF
RYGICFHVDLCLGGFVLPFARKLGYPMPPFDFSVKGVTSISVDVHKYGLAPKGTSVVLYR
NHDIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMMSLGLEGYLKNTKVIMEVT
KKIQKGIEEMPELFVIGRPDMTIVAFGSNVLDIFEVNDILSSKGWHLNALQRPNSLHICV
TLQHASVYEDFLQDLRESVQTVKQNPGPINGGLAPIYGAAGKIPDRSMVQELLVNYMDST
C
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggattcggtgaaggaactgttgattcaatttagagttactgctaattcattc
ttatctgaatatgaacctctagctcttgttctcgctcctctcctaactcttctcctagct
cgaattctccactctctgtttcgcgttttctacgaaaatggactcaaatccactcttttt
gggtttctcatggcctctatcaagttggtgcctggagttaagagctacatcgatgctgag
aagcagaaggttgtagataagttgcagtctggtagtaaatctaaacgagagggctggagg
gtcgagttgccaatggaaggcttaggaacagaaataattgagaaaatgaaggaagagaag
agaaatgatgcagtttggcaaggaaaatgttctggtacagtctacattggagggagtgaa
tctgaaggacatttttctattataaatgaggcatgttcaatgtttgcacacaccaaccca
ttgcatctcgatgtattccagagcatagcgcgatttgaggcagaagtagttgcaatgaca
gcgtcactgcttggtagcaaagaaaaggcttctggaggagaaatatgcggaaacatgaca
tctggaggaactgaaagtatattgttggctgtgaaatcatcccgagattatatgaaggtt
aagaagggaattacgagacctgaaatgattataccggaatcagcacactcagcatatgat
aaggcagcgcaatactttaacattaagttgtggcgtgttccagtaaataaagaatttcaa
gcagatgccaaagcaatcagacggcacattaacaggaataccgttttgattgttggatct
gcaccagggtttcctcatggcatcattgaccctattgaggagctgggtgaattggctttt
cgatatggaatatgtttccatgttgacctgtgtcttggtggttttgtattaccttttgct
cgtaagcttgggtatccaatgccgccttttgatttttctgttaaaggagtaacctcaata
tcagtagatgtgcataaatatggactggctcctaaaggaacgagtgtagttctgtacaga
aatcatgatattagaaagcatcaatttgttgctgtcacggaatggtcaggtgggctctat
gtgtctcctaccattgctggaagtaggccaggtggtctaatagctggggcttgggcagca
atgatgtcacttggactagaagggtacttgaagaacacaaaagtgatcatggaagtgacg
aaaaaaatacagaaaggaatagaggagatgcctgagttatttgtaattggaaggccagat
atgacaattgtggcgttcggatcaaacgtgctagacatatttgaggtcaatgatattttg
tcatcaaagggctggcatttaaacgcattgcagagacctaacagccttcatatatgcgtt
actctgcaacatgcatcggtttacgaggacttccttcaggatttgagagaatctgtgcaa
actgtaaaacaaaatccaggtcccataaatggaggcctggctccaatttatggtgctgca
gggaagataccagatagaagcatggttcaggagttgttagtaaattacatggacagtaca
tgctag
DBGET
integrated database retrieval system