KEGG   Ricinus communis (castor bean): 8286878
Entry
8286878           CDS       T01087                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8286878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8286878
   03041 Spliceosome [BR:rcu03041]
    8286878
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     8286878
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     8286878
Spliceosome [BR:rcu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    8286878
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 HSP90
Other DBs
NCBI-GeneID: 8286878
NCBI-ProteinID: XP_002522793
UniProt: B9S9X4
LinkDB
Position
9:6222970..6225631
AA seq 348 aa
MASKSKSDNPHSGDGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPR
GFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTE
DEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEI
KKAEPKKASNPPPAPSYGSNSRGRSYNDSYGGFGGSYGGFDGGFGPGPYRTPGSLGGRLS
SAYGYGSGGGDFGGSYGSFGGSSLGGYRGESSLGYSGRFGPYGGGFGGGYGGSGLGGYGS
GGEGYGSYGGTGYGGGYESGAGASYGGAGGLYGRGGYSGSSRYHPYAR
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggcttcaaagtccaaaagcgataatcctcactccggcgatggtgccagccctgggaaa
atttttataggaggattggctaaagacaccacgtatgctacttttaataaacacttcgga
aggtatggggaaataactgactcagtaattatgaaagatcggtacacgggtcagcctaga
gggtttggttttattacttatgctgatccttcagttgttgataaagttatcgaggacact
catgttattcatggcaaacaggtggagataaagaggacaattcctaaaggttctgggcaa
tcaaaggattttaagacgaagaaaatatttgttggtggaattccatcatcagtcactgaa
gatgagttcaagggtttcttctccaagtatgggcaagtggtggaacaccagattatacgt
gatcatgaaaccaatcgttcacgaggttttggatttattatttttgacagtgaagaaact
gtagatgaaatgttatccaatggaaatatgattgatatggccggtactcaggtggagatc
aagaaagctgaaccaaagaaagcctcaaacccaccacctgctccttcatatggtagcaac
tctaggggtcgttcttacaatgacagctatggtggatttggaggttcttatggggggttt
gatggagggtttgggcctggtccctataggactcctgggagtctgggtggtagacttagt
agtgcatatgggtacggtagtggtggtggggactttggtgggagttatggaagttttgga
gggagtagcctaggaggttaccgaggtgaatcttcccttggttattctggtcgatttgga
ccttatggtggcgggtttggtggaggttatggtggtagtggtttaggtggttatggtagc
ggaggtgaagggtatggaagttatggaggtacaggatacggtgggggttacgaatctggt
gcaggtgctagttatggaggagcaggtgggctgtatggaaggggaggctatagtggcagt
agtcggtatcatccttatgcaagatag

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