Ricinus communis (castor bean): 8286887
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Entry
8286887 CDS
T01087
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00900
Terpenoid backbone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8286887
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8286887
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8286887
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8286887
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8286887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8286887
NCBI-ProteinID:
XP_002522802
UniProt:
B9S9Y3
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All DBs
Position
9:complement(6163234..6167438)
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AA seq
352 aa
AA seq
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MTDPKSKFLEVYSLLKSQLLNDPAFEFTDDSRQWLEHMLDYNVPRGKLYRGLAVIDCYKA
LKEGEELTGDEILLASVLGWCMEWLQACAVVLDDIMDNSHTRRGRPCWFRLAKVGLIAIN
DGILLTNQCHRILRMYFREKPYYVDLLDLFNEVEFQSFSGEMIDLITTHKGEKDLSNYSL
SLYHRIVEYKSAYYSIYLPVACALILAGENLENHAEVKKILIEITIYFSVQDDYQDCFGD
PKITGKVGTDIEDCKCSWFIVKALELADENQKKVLYENYGKADPACVAKVKEIYEVLDLQ
GVYTEYERETYEKLTKTIETHPNKALKALWGRFTGTIWTVDRARNPDRAVEN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccaaaatcgaaattcttggaggtttattctctcttgaaatcacagctactt
aatgaccctgcttttgaattcactgatgattctcgtcaatggctcgagcatatgctggac
tataatgtacctagaggaaagctctaccgtggattggctgtcattgactgctacaaggca
cttaaggaaggagaagaactaactggtgatgaaattctccttgctagtgtgcttggttgg
tgcatggaatggcttcaagcatgtgcagtggttcttgatgacattatggataactctcat
acacgccgtggtcgtccttgttggttcagactagcaaaggttggtcttattgctataaat
gatggaatacttctcaccaatcaatgccacagaattctgaggatgtattttagagaaaaa
ccttattatgttgacctgctggatttatttaatgaggtggaattccaatcattctctgga
gaaatgatagacttgattacaactcataaaggagagaaagatctatcaaactactctttg
tcactttatcatcgcattgttgagtataaaagtgcttactattcaatttaccttccggtt
gcatgtgcattgattttggcaggtgagaatctcgagaatcatgctgaagtgaagaagatc
cttattgaaattactatctatttctctgtacaggacgattatcaagactgctttggagac
cccaaaataactggcaaggttggaaccgatattgaagattgcaagtgctcttggtttatt
gtgaaagctttagaacttgctgatgaaaaccaaaagaaagttttatatgaaaattatggg
aaagcagatccagcctgtgtcgcgaaagtgaaagaaatctatgaagttcttgatcttcag
ggtgtatatacagagtatgagagggaaacttatgagaagctgacaaagaccattgaaact
catcctaataaagctctaaaagctttgtggggaagatttacaggaaccatatggacagtt
gatagagcacgtaatccggacagagcagtcgagaattga
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