KEGG   Ricinus communis (castor bean): 8287059
Entry
8287059           CDS       T01087                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03022  Basal transcription factors
rcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8287059
  09124 Replication and repair
   03420 Nucleotide excision repair
    8287059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8287059
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8287059
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     8287059
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     8287059
SSDB
Motif
Pfam: Cyclin_N Cyclin_C_2 TFIIB RB_B
Other DBs
NCBI-GeneID: 8287059
NCBI-ProteinID: XP_015570329
LinkDB
Position
10:12341701..12345331
AA seq 378 aa
MADFQTSTHRVKWIFTPQQLVEKHKATNQRAKQMLEKYGTTRMEVDVDGSISYPEPQVNT
GDNADKHSRPKSLSVDEEQFMRVYYEFKLREVCSAFYFPHKIQATALIYFKRFYLQWSVM
EHDPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNYEMIVLQSLDFDLIVYAPY
RSVEGFINDMEDFCHATDDQTQMLKDLQVSAVAEVDKIMFTDAPLLFPPGQLALAALRSA
NGMHRVLDFERYLRDILSRQNLVHTISNLTESLDAIDSWVKKYKFPTEKDMKHINRKLKS
CWGHSSHDEYFLYACLFSNNYWPYRVFALFVLTNTSFYCLATERIGRRNQNTSPIRVQMK
CKMARPCSCKWNLHSFAG
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggccgattttcaaacctcgactcacagagtcaagtggatcttcactcctcaacagctg
gtagagaagcacaaagctactaatcaaagagccaaacaaatgttggagaaatatggcaca
acaagaatggaggtagatgttgatgggtcaatatcatatcctgaacctcaagtgaacact
ggagacaatgctgataaacattctcgtccaaagtcattgagtgttgacgaagaacaattt
atgcgagtatactatgaatttaaacttcgagaagtttgcagcgcattctattttccccat
aaaattcaggctacggcactcatatactttaaaagattttaccttcaatggtcggtcatg
gagcatgatccaaaacacataatgttaacctgtatatatgcagcatgtaagattgaagaa
aatcatgtatctgcagaggagcttggtaaggggatttctcaggatcatcaaatgattctc
aattacgagatgattgttcttcagagtttggactttgatcttattgtatatgctccatac
cgttcagttgaaggttttatcaatgatatggaggacttctgccatgcaacggatgatcag
actcaaatgttgaaggatttgcaagtaagtgcagtagcagaagttgacaaaatcatgttt
actgatgcaccattgctttttcctccggggcagttagcattggctgctttacgaagtgca
aatgggatgcatcgtgtgcttgattttgaaagatacctaagggacattctctctcgtcag
aatttggtgcatacaatttcaaatctcactgaatctctagatgcaatagattcttgggta
aagaagtacaaattccctacagaaaaggatatgaagcacattaataggaagctgaagtct
tgttggggtcatagctcgcacgacgagtactttttatatgcttgcttattttcaaacaat
tattggccctatagagtctttgcattgtttgtcctaactaacaccagtttttattgcttg
gcaacagaaagaatcgggagaagaaatcaaaacacaagtcccataagagttcaaatgaaa
tgcaaaatggcccgtccatgtagttgtaaatggaaccttcattcttttgctggttaa

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