Ricinus communis (castor bean): 8287059
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Entry
8287059 CDS
T01087
Name
(RefSeq) cyclin-H1-1 isoform X1
KO
K06634
cyclin H
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03022
Basal transcription factors
rcu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8287059
09124 Replication and repair
03420 Nucleotide excision repair
8287059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8287059
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8287059
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
8287059
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
8287059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
Cyclin_C_2
TFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
8287059
NCBI-ProteinID:
XP_015570329
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All DBs
Position
10:12341701..12345331
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AA seq
378 aa
AA seq
DB search
MADFQTSTHRVKWIFTPQQLVEKHKATNQRAKQMLEKYGTTRMEVDVDGSISYPEPQVNT
GDNADKHSRPKSLSVDEEQFMRVYYEFKLREVCSAFYFPHKIQATALIYFKRFYLQWSVM
EHDPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNYEMIVLQSLDFDLIVYAPY
RSVEGFINDMEDFCHATDDQTQMLKDLQVSAVAEVDKIMFTDAPLLFPPGQLALAALRSA
NGMHRVLDFERYLRDILSRQNLVHTISNLTESLDAIDSWVKKYKFPTEKDMKHINRKLKS
CWGHSSHDEYFLYACLFSNNYWPYRVFALFVLTNTSFYCLATERIGRRNQNTSPIRVQMK
CKMARPCSCKWNLHSFAG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccgattttcaaacctcgactcacagagtcaagtggatcttcactcctcaacagctg
gtagagaagcacaaagctactaatcaaagagccaaacaaatgttggagaaatatggcaca
acaagaatggaggtagatgttgatgggtcaatatcatatcctgaacctcaagtgaacact
ggagacaatgctgataaacattctcgtccaaagtcattgagtgttgacgaagaacaattt
atgcgagtatactatgaatttaaacttcgagaagtttgcagcgcattctattttccccat
aaaattcaggctacggcactcatatactttaaaagattttaccttcaatggtcggtcatg
gagcatgatccaaaacacataatgttaacctgtatatatgcagcatgtaagattgaagaa
aatcatgtatctgcagaggagcttggtaaggggatttctcaggatcatcaaatgattctc
aattacgagatgattgttcttcagagtttggactttgatcttattgtatatgctccatac
cgttcagttgaaggttttatcaatgatatggaggacttctgccatgcaacggatgatcag
actcaaatgttgaaggatttgcaagtaagtgcagtagcagaagttgacaaaatcatgttt
actgatgcaccattgctttttcctccggggcagttagcattggctgctttacgaagtgca
aatgggatgcatcgtgtgcttgattttgaaagatacctaagggacattctctctcgtcag
aatttggtgcatacaatttcaaatctcactgaatctctagatgcaatagattcttgggta
aagaagtacaaattccctacagaaaaggatatgaagcacattaataggaagctgaagtct
tgttggggtcatagctcgcacgacgagtactttttatatgcttgcttattttcaaacaat
tattggccctatagagtctttgcattgtttgtcctaactaacaccagtttttattgcttg
gcaacagaaagaatcgggagaagaaatcaaaacacaagtcccataagagttcaaatgaaa
tgcaaaatggcccgtccatgtagttgtaaatggaaccttcattcttttgctggttaa
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