Ricinus communis (castor bean): 8287160
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Entry
8287160 CDS
T01087
Name
(RefSeq) peroxisome biogenesis protein 6 isoform X3
KO
K13339
peroxin-6
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8287160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8287160
Membrane trafficking [BR:
rcu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
8287160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_lid_3
TsaE
RNA_helicase
Rad17
DUF815
nSTAND3
AAA_7
NPHP3_N
AAA_14
AAA_17
AAA_28
AAA_18
AAA_33
Parvo_NS1
AAA_24
ATPase_2
Mg_chelatase
TIP49
AAA_25
ATPase
IstB_IS21
AAA_6
PhoH
AAA_2
Vps4_C
DUF6307
MCM
HCV_NS4a
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
8287160
NCBI-ProteinID:
XP_015575666
LinkDB
All DBs
Position
1:7432060..7439139
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AA seq
931 aa
AA seq
DB search
MVERRRKPLVLSSTKFLVDSVLSSSRISRDDLPPRLLFPAGILRLSKDRIGTLDSTSKLT
SLDDSALVGLPTAALKKLAVTCGSPVLVKNIETNKRRIAQVVILDPPRNHGHTASCVKQP
NSHTMLVFPSYSLPSDEPLILDDEIAFLSPLLAFNLDLHISCLNSLVHQGNERLVSLFNS
KTNDDTCGEVSHHSLINLELEPLAQLPRYASHLRVSFVKIPECGMLDSLKGSSSVEAEDR
QGMIDLALHNYFKVDRYLARGDIFNICLHWNCNSVMCLPCNQRTQSTNGNLIFFKVVAME
PSDESILRINCTQTALVLGGTVPSALPPDLLIHEPKGFAPLQKDTVKTLASVLAPPLCPS
ALSSKFRVSVLLYGPAGCGKRTVVRYVCRRLGLHVVEFSCHNLMADKNASIALAQAFRTA
QRYSPTILLLRHFDVFRNLISHEGSPNDQVGLTSEVASVMREFTEPVAEDDDNYSDEKLN
NDLSAKDAANVSRGQVLLVAAAESSEGLPPTVRRCFSHEISMGSLTEEQRVEMVSQLLQS
GSEPLSNTEVEDVAKDIVGQTSGFMPRDLHALIADAGASLITRGNIQADEPELKDVNSST
GFKSVQEHESCNSIAQMMGKVYLPRALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKS
ILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELIN
MYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG
LNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFTLHQ
DVSLYTIAKKCPLNFTGADMYALCADAWFHAAKRKVLTSDSESASLVDQPDSVIVEFDDF
IKVLSELSPSLSMAELKKYELLRDQFEGSSK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaggaggagaaagcctcttgtcctctcttcaactaaattcctagtcgattct
gtactgagttcctcgaggattagcagagatgacttgccaccgaggctactgttcccagct
ggaattctccggttgtcgaaggacagaatcggaactttagactctacaagtaagttaact
tctcttgacgattctgctttggttggacttcctacagctgctcttaagaaattggccgtc
acttgtggttctccggtgcttgtcaagaatattgaaaccaacaaaagaaggattgcgcag
gttgttattctagatcctcccagaaaccatggacacacagcatcctgtgttaaacagccg
aattcgcacacaatgcttgtctttccttcttatagtcttccttcagatgaacctttgata
ttagatgacgaaattgcatttttgtctcctctgttagcttttaaccttgacttgcatata
tcttgtttgaattcacttgtccatcaagggaatgagaggctagtgtccctttttaattct
aaaacgaatgatgatacttgcggagaagtgagtcatcattctttaatcaatttagaattg
gaacctttggctcaattgccaagatatgcttcacatttgagagtttcttttgttaagata
cctgaatgtggtatgcttgattctttgaaaggaagttcatctgttgaagctgaagatcgc
cagggaatgattgatttggcattacataactactttaaagttgataggtatttagcaaga
ggtgatattttcaacatttgcttacactggaattgcaattctgttatgtgtcttccttgc
aaccaaaggacacaaagtacaaatggtaaccttattttctttaaggttgtggcaatggag
ccatcagatgaatccattcttcgaattaattgcactcaaacagctctcgtgcttggaggg
actgttccttctgctcttcctccagatctgctgattcatgaacccaaaggttttgcccct
cttcaaaaagacacagtaaaaactttggcatctgtacttgcaccacctttgtgcccgtca
gccctttcttcaaagtttagagtttctgtcctgctatatggtccagcaggatgtggaaag
aggactgttgttagatatgtttgccgtcgattgggccttcatgttgtggaattcagctgc
cataatctaatggctgacaaaaatgcatctattgcactcgctcaagctttcagaacagct
caaagatattcacccacaatccttcttctccgccattttgatgtcttccgaaatttaatt
tcgcatgaaggttcaccaaatgatcaagttggtctcacctcagaagttgcatcagtcatg
agggaattcactgaaccagttgctgaagatgatgataattactccgatgagaagttaaac
aatgatctttcagccaaggatgctgcaaatgtaagtaggggtcaggtgttgttagttgca
gctgctgagagttctgagggcctacctccgactgtaaggcgttgcttcagccatgaaata
agcatgggttcgctgactgaagaacagcgggttgagatggtatcccagttactgcagagt
ggttctgagcccctctctaatactgaggtagaagatgtcgcaaaggacatagttggacag
acgtctggcttcatgcctagggatttacatgctttaattgctgatgctggtgcaagctta
atcacaaggggtaatattcaagctgatgaacctgaactcaaggacgtgaatagttctact
ggattcaaatcagtgcaagaacatgagtcatgcaattctatagctcagatgatggggaaa
gtatatctgcctagagcattagagcgatctaagaagaggaacgcatcggctttgggtact
cctaaggttcctaatgtgaaatgggaagatgttggagggcttgaggatgtgaagaaatcc
attttggatactgttcagttacctctcctgcataaggatttattttcttctgggttgcgt
aagcgctctggcgttctgctgtacggtccaccagggacaggaaaaaccttattggcgaaa
gctgttgcaacagaatgttctttaaattttctaagtgtgaaagggcctgaactgatcaat
atgtacattggagagtcagagaaaaacgtccgtgacatttttcagaaggcaaggtcagca
cgcccgtgtgtgatattcttcgatgaacttgattctcttgccccagctcgaggcgcctca
ggagattctgggggtgtcatggacagagtagtttctcagatgctcgcagagattgatggc
ctaaatgattccacacaagacctatttattataggggcaagcaacagaccggatcttatt
gatccggcacttctcagacctggccgatttgataagctgttatacgttggagtaaactct
gatgcatcttacagggagcgggtccttaaggcacttacccgtaagtttacattgcatcaa
gatgtctctctttacacaatagcaaagaaatgccccctaaacttcactggtgcagacatg
tatgctttatgtgcagatgcttggtttcatgctgcgaagcgcaaggttttgacttcagat
tcagagtctgcttccctggttgatcaaccagattcagtaattgttgaatttgacgatttt
ataaaggtcttgtctgagctgtctccctccctctcgatggcagagcttaaaaagtatgag
ttgctgcgggatcagtttgaaggctcatcaaaatga
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