Ricinus communis (castor bean): 8287179
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Entry
8287179 CDS
T01087
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8287179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8287179
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
8287179
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
8287179
NCBI-ProteinID:
XP_002520681
UniProt:
B9S3W2
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Position
1:7297503..7301400
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AA seq
585 aa
AA seq
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MLRMMASSFPEEVLEHVLLFIQSDKDRNAVSMVCKSWYEIERWCRRRIFVGNCYAVSPTM
VIRRFPDVRSIELKGKPHFADFNLVPEGWGGYVFPWIVAMSSAYPWLEEIRLKRMVVSDE
ALELISKSFKNFKVLVLSSCEGFSTGGLAAIAANCRNLRELDLRESEVDDPSGHWLSHFP
DSFTSLVSLNISCLGSEVSFSALKRLVGRCPNLRTLRLNRAVPLDRLANILRRAPQLVEL
GTGAYSAELRPDVFSTLSGAFSGCKELKSLSGFWDVVPGYLPAIYPICSGLTSLNLSYAT
IQSPDLVKLVSQCQSLQRLWVLDYIEDVGLEALATFCKDLRELRVFPSDPFGPEPNVSLT
EQGLVVVSEGCPKLQSVLYFCRQMTNDALITIARNRPNMTRFRLCIIEPRMPDNVTHQPL
DDGFGAIVQYCKDLRRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDLGLHHVLSGC
ENLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDE
RGPPDTRPESCPVEKLYIYRSVAGPRFDMPGFVYTMDEDSALRFS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatgatggcgagttcgttccctgaagaggtgcttgaacatgtgttactgttc
atacagagcgacaaagacaggaacgcagtgtcgatggtgtgcaagtcgtggtacgagatt
gagaggtggtgcaggaggaggatatttgtggggaactgttacgcggtgagtccgacaatg
gttataaggaggtttccggatgttagatcgattgagctaaaagggaagccgcattttgcg
gattttaatttggtgccggagggatggggcgggtatgtctttccgtggattgtggccatg
agtagtgcttatccttggcttgaagagatcagattgaaaagaatggttgttagtgatgag
gctttggagttgatttctaagtcttttaagaattttaaggttctggttctttcttcttgt
gagggcttctccactgggggtcttgctgccattgctgccaattgcaggaatctgagggag
ctggatttgcgggagagtgaggtggatgatcctagtgggcattggttaagccactttccc
gactcattcacgtcactggtctctcttaatatttcctgcttagggtctgaggtgagtttc
tcagccctgaagcgcctggtgggccggtgccccaatctgaggactctccggctcaaccgt
gctgtgccccttgacaggcttgctaatatacttcgccgggcaccccagctggttgagttg
ggtacaggtgcctactcagcagagctgcggcctgatgtcttctcaactctatccggagct
ttctctgggtgcaaggagctgaaaagtttatctgggttttgggatgtggtcccaggttac
cttccagcaatttatcccatctgctctggcctaacatcattgaacttgagctatgccact
atccaaagccctgatcttgttaagctcgttagtcaatgtcagagtttgcagcgcctgtgg
gtattggattacattgaagatgttggccttgaagctcttgcaacattttgcaaggacctg
cgagaattgagggtttttccatctgatccatttggcccagaaccaaatgtatccttgacg
gaacagggtcttgttgttgtttcagagggctgccctaagcttcagtccgttctgtacttt
tgccgtcagatgactaatgatgccttgataacaattgccaggaaccgtccaaacatgaca
cgttttcgtctttgtattattgaaccacgaatgcctgataatgtaacccatcagccacta
gatgatgggtttggagccattgttcaatactgcaaggatctccggcgcctttccttgtca
ggtctcctaactgatcgtgtgtttgagtacattggaactcatgctaaaaagctagagatg
ctatctgtagcttttgctggagatagtgatcttggactccatcatgtgctctctgggtgt
gaaaaccttcgcaaactagagattagagattgcccctttggggacaaggctcttttggcc
aatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcggtgagttat
ggagcatgtaagctgctaggtcagaagatgcctaggctgaatgttgaagttattgatgag
aggggacctccagatacgaggccagaaagttgtcctgttgagaagctttacatctataga
agtgttgctgggcctcggtttgatatgcctggttttgtttatacaatggatgaagattct
gcattgaggttttcatga
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