Ricinus communis (castor bean): 8287409
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Entry
8287409 CDS
T01087
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8287409
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8287409
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8287409
Protein phosphatases and associated proteins [BR:
rcu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8287409
Spliceosome [BR:
rcu03041
]
Common components
Common spliceosomal components
SR proteins
8287409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
8287409
NCBI-ProteinID:
XP_002509834
UniProt:
B9RCF0
LinkDB
All DBs
Position
5:complement(25564042..25568749)
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AA seq
204 aa
AA seq
DB search
MPYSREGRSASPRASISPAKARRSRSLSRSRRSRSRSRSVDAANPGNNLYVTGLSTRVTT
GDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLEDAERCVKYLNRSVLEGRLITV
EKAKRRRGRTPTPGRYHGLRERRGRGYRRSRSFSPRRWDDRNRDYNPRDRRGRSRSPYSR
RGDDYDSYRRHRDRSLSAERDYRR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgccatactcaagggaagggaggtccgcttcaccacgtgcctcaatttcacccgctaaa
gctcggcgatcgaggtcattgtcaaggtctcgtcgaagtcgatccaggagtcgttctgtt
gatgcagcaaaccctggaaataacttgtatgtaactgggttatctaccagggttacaact
ggtgaccttgagaagtattttgggaaagaaggaaaggtactggagtgccatctggtaaca
gatcctcgcaccagagaatcccgtggatttgcttttgttaccatggaaacattagaggat
gctgagcgctgtgtcaagtacttgaatcgttcagtgcttgaaggacgattaatcacagtg
gaaaaggcaaaaaggaggcgtggcaggacaccaactccgggcagatatcatggtctgaga
gagaggcgaggacgtggctacagacggtcccggagcttctcacctcgtcgatgggatgac
agaaacagggattataatccaagagaccggcgtggaaggtcacgctctccgtatagtagg
aggggagatgattatgattcatacagaaggcacagggatcgttcattatcagctgagcgt
gactaccgtagatag
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