Ricinus communis (castor bean): 8287489
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Entry
8287489 CDS
T01087
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8287489
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8287489
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8287489
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8287489
03041 Spliceosome [BR:
rcu03041
]
8287489
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
8287489
Protein phosphatases and associated proteins [BR:
rcu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
8287489
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8287489
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
8287489
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8287489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
8287489
NCBI-ProteinID:
XP_025014029
LinkDB
All DBs
Position
6:22730364..22734259
Genome browser
AA seq
316 aa
AA seq
DB search
MATQGQAFIDPAVLDDIIKRLTEVRSARPGKQVQLSEAEIKQLCVASRDIFMQQPNLLEL
EAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYP
ENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKSFTDCFNCLPVAALIDDKILCMHGG
LSPDLTNLDQIRSLPRPVAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEF
LAKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDENLMCSFQI
LKPAEKKAKYMMPNKI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcaagggcaggcttttattgaccctgccgtactggatgatataattaaacgg
ttaacggaggtccggtcagcaaggccaggtaagcaagtgcagctatcagaggcagagatc
aagcagttatgtgttgcttctagagatatcttcatgcaacaacctaatttgttagagctt
gaagcacccattaagatttgcggtgatattcacgggcaatatagtgatctattaaggctt
tttgaatatggaggttttcctcctgaggcaaattacttatttttaggggattacgttgat
cgtggcaagcagagtttggaaactatctgccttttgctagcttataagattaaatatcct
gagaacttttttcttctgagaggaaaccatgaatgtgcttcaataaatcggatatatgga
ttttatgatgaatgtaagcggaggtttaatgtgaggctttggaaatcctttactgactgt
ttcaactgccttcctgttgcggctcttatagatgataaaatattgtgcatgcatggtggt
ctttcccctgatttgacaaacttggatcagatcaggagtttgcctcggccagttgctatt
ccagacactggtttactatgtgacttgttgtggtcggatcctgggagagatgttaaggga
tggggaatgaatgaccgaggagtttcatatacttttggtcctgataaggtgtcagagttc
ctggcaaagcatgatttagatcttgtttgtcgtgcacatcaggttgtggaggatgggtat
gaattctttgcagacaggcaacttgtcactattttctcagctcccaactattgtggtgag
tttgataatgctggtgctatgatgagcatagatgaaaatctgatgtgctcctttcagatt
ctaaagcctgccgaaaaaaaagctaaatatatgatgccaaacaaaatatga
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