Ricinus communis (castor bean): 8287665
Help
Entry
8287665 CDS
T01087
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8287665
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
90S particles
Other 90S particles
8287665
Pre-60S particles
Other pre-60S particles
8287665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
RIX1
Motif
Other DBs
NCBI-GeneID:
8287665
NCBI-ProteinID:
XP_015581075
LinkDB
All DBs
Position
10:19824655..19838416
Genome browser
AA seq
1175 aa
AA seq
DB search
MKPDTKEPETEIEPPFKDDSDICNQLFSRYSASKAVHHRHLLATAAAIRSILSTDDSYPL
TPVAYFAAAVDNLSDLKTLDSAAIAALLSFVSILVPLIPEKEINSDQASKAVQVLVEVME
SEEFELGAASVSGVVKCLGILIVGFCDLEDWSSLKLGFETVLKSCVDKRPKVRRGAQDCL
EKVFKSLRYSTVIEESGKLVFLALKSYRAIALTLSELKVVDDSKDKTLSEPRNLEVLHLL
NLLKLVVPYLSVKFSSKVLSELLKLIRPKFSPLTRHIFRSIEAYFENSREEVFSPHLENI
ISSLCLYVSVGENPVDTVISAATLLKVALDKLHAGGSRSSWMRNVPKVFGTVAGLLTCET
AAASQASNIMKEMINHYIDKKKLMTDESLSFEDVNQETVEADVIKLTCSVFEKTLSSCNG
LPSEHLLEVISALFLNLREVSFIFMKNLVLKLADLMNSISQDKSDINYLQNCIGRAVASM
GPERILTLIPISFHADNFTCSNVWLIPILKKHVVGASLGYYMEHIVPLAKSFMQASKKVK
KSVIGEDLQAYAYGLWGLLPAFCHYPVDIHKKFGSLAKILTAFLNEDSFMHQNVAVALQA
LVNQNRSAVVSKNTAGESHINAVKDALLEFRTIPTYSKKTATKNIKTLSSYSTELLQALV
DLFVDSLPEKRLYIKDAVGCLASITDSSITKNIFMSLLERFQLVNDRGEFEQLVNHGDEL
IEPEQGSFRANEEDGKRCVIMELASSLIEGAKEDLINLIYNFVISVFKNTAVTSHCEAYH
TLSRVLEQEHAWFCSARFAELIELLIGLKPPTDVASLKNRFACFQILMIHILEACLEEED
TKAFLMLNEIILTLKGADDEARKVAYDTLLMISSSFRNLSSASSGETYHKLISMIMGYLS
GPSPHIKSGAVSALSLLVYNDADICLKMPELVPSLLSLLQSKAVEVIKAVLGFVKVLVSS
LQAKDLQNLLSDITSNILLWSTVSRFHFRSKVTVILEIMRRKCGSAAVELVTPEKYKSFV
KTVLQNRHHNTTSKEGSTGMETKLAYSSSKRIDKRKHKELGFVSEEKGRKRKRNNKENRN
PPTFAEPGVSSGDGGGPEGAKREWHSKYGKPVKGRSTDNGKKRKFIKQPASGGKKGVERT
IMGKKGGTVFHKPASTPKFPKHNKFGKKHKDVREA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagacacaaaagaacctgaaactgagattgaacctccattcaaagatgactca
gatatctgcaaccaactattctcccgctactccgcctccaaggccgtccaccatcgccac
ctccttgccaccgccgccgccatccgctccattctctctactgacgattcctatcccctc
actccggtggcttactttgccgccgcagtcgataacctctctgatttaaaaaccctagat
tccgctgcaatcgcggcgcttttgtcctttgtttcgatactagtcccattgattccagag
aaggagataaatagtgatcaggctagcaaggcagtgcaagtgttggtggaagttatggag
agtgaggagtttgagttaggagcggcaagtgtgagcggtgtggttaagtgtttagggatt
ctgattgttgggttttgtgatttggaagattggagctctttgaaactggggtttgaaact
gtgcttaaatcgtgtgttgataagcggcccaaggttaggaggggtgctcaagattgcctt
gagaaggtttttaagtctcttcggtattctactgttattgaggaatcggggaagttggtg
tttttagcactcaagagttacagggccattgcacttacactaagtgagttaaaggttgtg
gatgattctaaagataaaacactatcagagcctagaaatttagaggttctgcatttgcta
aatttgcttaagcttgttgttccatatctctctgttaagttcagttcgaaagttttgtcg
gaattacttaagctcattcgtcctaagttctcacctttgacaaggcatatttttagaagt
attgaagcatattttgaaaattcaagagaggaagtattcagcccacatttagaaaacatt
ataagttctctctgtttatatgtatctgtcggggagaatccagtggatactgtcatttct
gcagcaactttattaaaagttgctttagacaaacttcatgctggaggatcaaggtcttcg
tggatgaggaatgttcctaaagtttttggtactgtagcaggtcttctgacttgtgagact
gctgctgcatcacaggcttccaatatcatgaaggagatgatcaaccattatattgataaa
aaaaagctcatgactgatgaaagcctgtcttttgaagatgtaaaccaagaaactgttgaa
gcagatgtgataaagttgacatgttctgtctttgagaaaactttaagctcatgcaatggg
cttcccagcgagcatcttttggaagtcatatctgctttattcttgaaccttcgggaggtc
tcatttatcttcatgaagaatcttgttctcaagcttgctgacttgatgaacagtattagc
caggataaatctgacataaattatcttcagaattgcattggacgtgctgtagcttccatg
gggccagagaggatacttacactcatacccatctctttccatgctgataattttacttgt
tcgaacgtctggttgatacccatactgaagaaacatgttgttggagcatcgctagggtat
tacatggagcatattgtgcctcttgcaaaatccttcatgcaagcgagtaagaaagttaaa
aagtcagtaattggtgaagatctgcaggcttatgcttatggtctctggggactgctccct
gccttttgtcactatcctgtcgatatccacaaaaagttcgggtctttggctaaaattcta
actgcctttctgaatgaagattctttcatgcatcaaaatgttgctgttgccttacaggct
cttgtgaatcaaaatagaagtgcagttgtctctaagaatactgctggcgagtcacatatc
aatgcagtgaaggatgctcttttggagttcagaactatacccacttattcgaagaaaact
gcaaccaaaaacatcaagactttgtcgtcatattcaactgagttgcttcaggctctagtg
gacttatttgttgattctctaccagagaagcgcctatatataaaggatgctgttggatgc
ttagcttctattacggactcttctatcaccaagaacattttcatgtcactgctggagagg
tttcagcttgtgaatgacagaggcgaatttgaacagctggttaaccatggagatgaattg
attgaaccagagcaaggcagctttagggcaaatgaagaagatggaaagaggtgtgtgatc
atggagttagcttcttctctcattgaaggagccaaggaggatcttatcaatctaatatat
aattttgttatttctgtatttaagaatactgctgtgaccagtcattgtgaagcataccac
actttaagcagggttttggagcaggaacatgcctggttctgttctgctcgatttgcagag
ttgatagagttgttaattggtctgaagcctcctactgatgttgcttctttaaaaaatcga
tttgcttgtttccagatccttatgattcacatattggaggcatgcttggaggaggaagat
acaaaggcttttcttatgctcaatgagatcatactcactttaaagggtgcggatgatgaa
gctaggaaagtggcttatgacacactccttatgataagttcctccttccgaaatttatca
tctgcaagttctggtgaaacttatcacaaactgataagcatgataatgggttatctttcg
ggtccatcccctcacataaagagcggagcagtgtcagcactgtctttactggtgtataat
gatgcagacatctgtctcaagatgcctgaacttgttccttcactcttatccttgctgcaa
agcaaagctgtggaagtcataaaagctgttttgggttttgtgaaagtactagtatcatcc
ttgcaagctaaagatctgcagaatcttctatctgacatcaccagcaacatactcctgtgg
tcaactgtctctagatttcattttagatctaaggtgacagttatactggagattatgaga
cggaagtgtggttctgctgcagttgagttagttactccagagaagtataagagttttgtt
aaaactgttttgcagaatcgtcatcataacacaacatcaaaggaaggctcaactggtatg
gaaacaaagcttgcatattcatcctccaaaaggattgacaagcggaagcacaaagaattg
ggttttgtatctgaggaaaagggaaggaagagaaagagaaataataaggaaaacaggaac
cctcctactttcgcagagccgggtgtatcaagtggtgatggtggtggacctgaaggggct
aaaagagagtggcattctaaatatggaaaacctgtaaagggtcgatcaactgataatgga
aaaaagaggaaatttatcaaacagcctgccagtggtggaaaaaaaggggtggagcggacg
atcatgggcaagaaagggggaacagtatttcataaacctgcttccactcccaaattccct
aaacacaataaatttgggaagaaacacaaagatgttcgagaagcctga
DBGET
integrated database retrieval system