Ricinus communis (castor bean): 8287745
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Entry
8287745 CDS
T01087
Name
(RefSeq) high mobility group B protein 13
KO
K09273
upstream-binding transcription factor
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8287745
03021 Transcription machinery [BR:
rcu03021
]
8287745
Transcription factors [BR:
rcu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
8287745
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
8287745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
8287745
NCBI-ProteinID:
XP_002509934
UniProt:
B9RCQ0
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All DBs
Position
5:26251545..26254225
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AA seq
514 aa
AA seq
DB search
MTDTAIATPINDQVPTKKPRKKRNHPLKEKNPSTNEANIMAQKLSAISPVPAPPSDAADA
SKENHESLSQPRSSPKKLKAKAATKAKQTKQSSSSSATTTTNSFEKEMQEMQEMLQKLKL
EKEKTDELLKEKDEILKAKQEELENKGKEQEKLQMELKKLQKLKEFKPNMNFPLLQSFNE
EQDKKKKKKKGGHEKKRPSPPYILWCKDQWNEVKNENPNAEFKEISNILGAKWKNVSTED
KKPYEDKYQAEKEVYLQVVNKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQETEKENK
KTKKEKDPLKPKQPMSAFFLFSNERRASLLAENKNVREVAKIAGEQWKNMTEEQKGPYEE
MAKRNKLRYMQEMEAYKQKKDEEAMNLKKEEEEMFKLQKQEALQLLKKKEKTDNMIKKTK
ENRQKKKQQNVDPNKPKKPASSFLIFSKEARKNLAQERPVINNSTLNALISVKWKELSEE
ERQIWNAKAAEAMEIYKKEMEEYNKTAATSDEKA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacagcaattgctacaccaatcaatgaccaggttcccacaaagaaaccaaga
aaaaagagaaaccaccctctaaaagagaaaaacccatcaacaaatgaggccaatatcatg
gctcaaaagctctctgcgatctctccggtccctgctccgccatcagacgcagctgatgct
tccaaggagaaccatgagagtctctctcaacctcgttcttcacccaaaaaattaaaggcc
aaagcagccactaaagcgaagcaaaccaagcagtcttcttcttcttctgctactacaact
actaattcttttgaaaaggaaatgcaagaaatgcaagaaatgcttcaaaagttgaagctt
gagaaagaaaagactgatgaattactaaaagagaaagatgagatcttgaaagcgaaacaa
gaggagcttgaaaataagggcaaagaacaagagaagttgcaaatggaattgaagaaattg
caaaagttgaaggagtttaaacccaacatgaatttccctctactccaatctttcaacgag
gaacaagacaagaagaagaagaagaagaagggtggacatgaaaagaaaaggccatctcca
ccttacatcttgtggtgcaaagatcagtggaatgaggtcaagaacgagaatccgaatgct
gaatttaaagagatctcaaatattttgggggcaaagtggaagaatgttagtacagaggat
aagaaaccttacgaggacaagtatcaggctgaaaaagaagtctatttgcaggtagttaat
aaggagaaaagagagagtgaagcaatgaagctattggaagaggaacagaagcaaaagaca
gcaatggagttgctcgaacaataccttcagtttaagcaagaaacagaaaaggagaacaag
aagactaagaaagaaaaggatccattgaagccaaaacagcccatgtcagcttttttcctg
ttctcgaatgagagaagggcttctcttcttgcggagaacaagaatgttagagaggtagca
aagattgctggtgaacaatggaagaacatgacagaagaacagaaggggccttatgaagag
atggctaagaggaacaagttgaggtatatgcaagaaatggaggcttacaagcagaaaaag
gatgaagaagctatgaatctcaagaaagaagaggaagagatgtttaagcttcagaaacag
gaagccttacaacttcttaagaagaaggagaaaacagataacatgattaagaaaaccaaa
gagaaccgccagaagaagaagcaacagaatgttgatcctaacaagcctaaaaagcctgca
tcttcattcttaatattcagcaaagaagccaggaaaaacttagcgcaggagcgtcccgtg
atcaacaactctaccctcaatgctctgatttcagtgaaatggaaggaactcagtgaagaa
gagaggcaaatctggaatgccaaagctgctgaagccatggaaatatacaagaaggagatg
gaggagtacaacaagactgctgcaacctcggatgagaaagcttaa
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