Ricinus communis (castor bean): 8287875
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Entry
8287875 CDS
T01087
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X4
KO
K14016
ubiquitin fusion degradation protein 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8287875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8287875
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
8287875
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Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
DUF5088
Motif
Other DBs
NCBI-GeneID:
8287875
NCBI-ProteinID:
XP_002533746
UniProt:
B9T677
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All DBs
Position
1:35455953..35459249
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AA seq
315 aa
AA seq
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MDHLAHNSSMFERSYRCYPGSFIDKPHLEKGDKIIMPPSALDQLASLHIDYPMLFELRNP
SAERVTHCGVLEFVADEGLIFLPYWMMENMLLQEGDLVQLKNASLMKGTYVKLQPHTTDF
LDISNPKAILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVETKPSPAVSIIETDCEVDFA
PPLDYKEPEKPSPSPRSNQTRPKVEEEPAKKIPKFSPFSGAARRLDGKLSTQPVAAVTEP
VLKQHQSEAGTDIRGSKPSNAASRSHSGKLIFGSNANQPQNEAREIAAKKSSPEAPQKAE
PPKFQAFTGKRYSLK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatcacctagctcacaacagctcaatgtttgaacgcagctatcgttgttaccctggc
tcttttattgacaagccgcatttggaaaagggtgataaaattattatgcctccctcagca
cttgatcaacttgcttctttgcacattgactacccaatgctattcgaacttcgaaatccc
tctgctgagcgagttacacattgcggagttctggaattcgttgcagatgaaggcctaata
ttcttgccgtattggatgatggaaaacatgctccttcaagaaggagaccttgtgcaattg
aaaaatgctagcctcatgaagggaacttatgtaaagctgcagccccacacaacagatttc
ttagatatctccaaccccaaagcaatcttagagacttcattgaggaactactcttgttta
acaactggtgataccataatggttgcttataacaacaagaaatattacattgatatagtt
gaaacaaaaccatcccctgcagttagtattattgaaacggattgcgaggtggattttgct
ccccctcttgattataaagaacctgaaaagccatcaccgtctcctaggtcaaaccagacg
cgtcctaaagttgaagaagagccagccaaaaagataccaaaattcagtcctttcagtggt
gccgcaagacgcttggatggaaaactatcaacacaaccagttgcagcagttactgaacca
gtgctgaaacaacaccaatcagaggctgggacagatatcaggggctccaagccatcaaac
gctgcatctcggtctcactcggggaagctcatctttgggtcaaatgcaaaccaaccccaa
aatgaagcacgagagattgcggcaaagaagagcagtccagaagctcctcagaaggcagaa
ccacccaagttccaagcattcacagggaagagatactctttgaaatga
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