Ricinus communis (castor bean): 8288176
Help
Entry
8288176 CDS
T01087
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00520
Amino sugar and nucleotide sugar metabolism
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8288176
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcu01003
]
8288176
Enzymes [BR:
rcu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
8288176
Glycosyltransferases [BR:
rcu01003
]
Polysaccharide
Structural polysaccharide
8288176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF2564
Motif
Other DBs
NCBI-GeneID:
8288176
NCBI-ProteinID:
XP_002525229
UniProt:
B9SGW0
LinkDB
All DBs
Position
10:complement(14107072..14111133)
Genome browser
AA seq
647 aa
AA seq
DB search
MKMKLRNLVVGMLLVTVIAPIILYTDNRFSTFNSSSSTTEFLEDVASLTLSGDSRDHLNV
LPQESTSLLKEPIGIVYTDNSTISPPHTSTIQFHSSPLPQDTREHKSTRVLSATNDQHQS
QTDTIIRQVTNQQASRTTDANNKNSKQNPSDGGSQNAVVQQSSLTSEKVTEKGPPKSRTD
KQTAQTPVPDARVRQLRDQLIRAKVYLSLPSTKNNPHFTRELRLRIKEVQRVLGDATKDS
DLPKNANDKLKAMDQSLAKGKQVQDDCASVVKKLRAMLHSSEEQLRVHKKQTMFLTQLTA
KTLPKGLHCFPLRLTNEYYSLNSSQQQFPNQEKLEDPQLYHYALFSDNVLAAAVVVNSTI
THAKDPSKHVFHIVTDRLNYAAMRMWFLVNPPGQATIQVQNIEELTWLNSSYSPVLKQLG
SQSMIDYYFRTHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPMLNKVLFLDDDIVVQKD
LTGLWSLDLKGNVNGAVETCGERFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDQ
WKRQNITGVYHTWQKLNHDRLLWKLGTLPPGLITFWKQTYSIDRSWHVLGLGYNPNVNQR
EIERAAVIHYNGNLKPWLEIGISKYRNYWAKYVDYDHVYLRECNINP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaagctccggaatttggtggtggggatgcttttggtcaccgtaattgcccct
attattctctacactgataatagattctctaccttcaactcttcttcctccacgaccgaa
ttcctcgaagatgttgcttctctcactctttccggtgattccagggatcatctaaatgtg
ttaccccaggaatccacttctcttcttaaagaacccattggaattgtatatactgacaac
tctaccatttcacctccacacacctccaccattcaattccatagttctccattaccgcaa
gatacaagagagcataaatctactagagtattatccgccaccaacgaccagcatcaatct
caaaccgatactatcatcagacaggttactaatcaacaagcaagtcggacgactgatgcc
aataataagaattccaaacagaacccatccgatggaggatctcaaaatgcggttgtgcag
cagtcttctctaacttctgaaaaggtcactgagaaaggaccccccaagtctagaactgat
aaacagacagctcaaacacctgtgccagatgctcgggtgcggcaactcagagaccaactt
attagggcaaaggtatacttgtctcttccatccacgaaaaacaatccccattttacaagg
gagcttcggttgcggataaaggaagttcaacgtgtgcttggagatgcaactaaagattct
gatctgccaaagaatgccaatgataaattgaaggcaatggaccaatcattggcaaaagga
aagcaggtgcaggatgactgtgcctcggtggtaaagaagcttcgagctatgctccactca
agtgaagagcagctccgagtgcataagaagcaaaccatgtttttgacacaattaacagca
aaaacacttcctaagggtctgcattgttttccattacgcttgaccaatgagtactacagc
ttgaattcttctcagcagcaatttccaaatcaagagaaactagaagaccctcagctgtac
cactatgcattattctcagacaatgttctggcagcagcagttgttgtgaactccaccatt
acccatgctaaggatccttcgaaacatgttttccacattgttactgataggctcaattat
gctgcaatgagaatgtggtttctagtgaatccaccaggccaagctactattcaggttcag
aatatcgaagagcttacctggttgaattcaagttacagtcctgttctcaagcagttgggt
tctcaatcaatgatagattattattttaggacacatcgtgcaaattctgattctaatttg
aagtatcggaacccaaagtacttatccatcttgaaccatctacgcttttacctgcctgag
atctttccaatgctcaacaaagtgttgttcttagatgatgatatagtggtacaaaaggat
cttacaggcctttggtcccttgacttgaagggcaatgttaatggtgctgttgagacttgt
ggagaaagatttcatcgttttgatcgatatctcaacttttcaaatcctcttatctcaaag
aattttgatcctcatgcttgtggatgggcatacggaatgaatgtctttgatctggatcaa
tggaagaggcaaaacatcactggtgtatatcatacatggcagaagctgaatcatgacaga
ttgctgtggaagttggggaccttaccacctggcctcatcactttttggaaacagacttat
tccattgatcgctcttggcatgtactaggccttgggtataaccccaatgtcaaccaaaga
gaaattgaacgagcagctgtcatacactataatggtaacttgaaaccatggcttgagata
ggcatatccaagtaccgcaactattgggcgaaatatgtagattatgatcatgtgtatttg
cgtgagtgcaacattaacccctaa
DBGET
integrated database retrieval system
