Ricinus communis (castor bean): 8288260
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Entry
8288260 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8288260 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03030
DNA replication
rcu03410
Base excision repair
rcu03420
Nucleotide excision repair
rcu03430
Mismatch repair
rcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8288260
03410 Base excision repair
8288260
03420 Nucleotide excision repair
8288260
03430 Mismatch repair
8288260
03440 Homologous recombination
8288260
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8288260
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8288260
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8288260
Protein phosphatases and associated proteins [BR:
rcu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8288260
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
8288260
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
8288260
MMR (mismatch excision repair)
DNA polymerase delta complex
8288260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
8288260
NCBI-ProteinID:
XP_015578067
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All DBs
Position
9:26358749..26365106
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AA seq
517 aa
AA seq
DB search
METLGILEEIESLVSDKLEVVSYKWLSRNFLVSSNDAKRLLQEFAEKHKSGLEVVYALSG
WLKNNPQSYHIRLVSRPKLEEAKKEFDGNCSIHVYSVQPAIPKDPAALWNDEFVQAEELF
RQPNVADNCLRDNRFCGILNPFVKRNVAGNPVSNAVSQPKSVGIPEPSKSNSAHENIKVP
LQQIKDEQSGPMVGKQSTILVKDIKSESHETEDQSSKPHACGEKVLPTNEKKGQGDKSSS
SLANLWGRASAKSKLTSAEDNKNLVSNPIASAEAQVCSSEAIEDQSSADEAKDVNFKRTS
NGEGSRKRRVVFDFSDDEYEDAVSLASPEAPKEKMNKIFLSEKPNVNGQIEDKREVKEES
STDKAPNQVPREKISVSSKRFNSNDSSNEKKHSPITGGDGKADIVTNDPPHSPKRRKVLK
TRIDERGREVNEVVWEGEDTEKIKADSNSPKNADINAPKKAENNAITSTVNNRAPVAKKS
PAVGSGASTNTGGNAGNKKGGSKDPKQGNLLSFFKRV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctaggcatacttgaagagatcgaatctctcgtctctgataagcttgaagtg
gtttcgtacaagtggctgagtcggaattttttggtttcatcaaatgatgcaaagaggttg
cttcaagagtttgccgagaaacataaaagtggtctggaagtagtatatgctctgtccggc
tggttgaaaaacaatcctcagagttaccatataaggcttgtctcgagacctaaacttgaa
gaggctaaaaaagaatttgatggcaattgctcaattcatgtctatagtgtacaacctgct
atcccgaaggatccagctgccctatggaatgatgaatttgtacaagcagaagagcttttt
aggcagccaaatgttgctgataattgtttaagagataacaggttttgtgggattcttaat
ccctttgttaagcgcaatgtagcaggaaatcctgtaagcaatgcagtttcacagcctaaa
agtgtgggtatcccagagccatccaaaagtaattctgctcatgaaaatattaaagttcca
cttcagcaaattaaagatgagcaatcaggtccaatggttggtaagcaatctaccatattg
gtaaaggacataaaatctgaaagtcatgagacagaagatcaatcctccaagcctcatgca
tgtggagaaaaagtcttgcccactaatgaaaagaaaggtcagggtgataaaagttccagt
tcattggcaaatttatggggtcgtgcatcagcaaagtcaaagctcacttctgcagaagac
aataaaaatctcgtttcgaatcctattgccagtgcagaagctcaagtttgttcttctgaa
gcaatagaagatcagagcagtgctgatgaggctaaagatgtgaactttaaacgcacttct
aatggtgaaggtagtagaaaaaggagagtagtttttgatttctcagatgatgagtatgaa
gatgcagtcagcctagcatcaccagaagctccaaaggagaaaatgaataaaatatttctt
tctgagaaacccaatgtcaacggccaaatagaagataaaagggaagtcaaggaagaatca
tcaactgacaaagcacctaatcaagttccaagagaaaaaatttcagtttccagcaagaga
ttcaattctaatgactcctctaatgaaaagaagcatagccctatcactggaggggatggt
aaggctgatatagttactaatgatcccccacattcacccaaaaggaggaaagttttgaag
acccgtattgatgagcgtggtagagaagtaaatgaggtagtctgggaaggggaagataca
gaaaaaattaaagctgacagtaattctccgaagaatgccgacattaatgcaccgaagaaa
gctgaaaataatgcaattacgagtactgtcaacaacagggcacctgtagctaagaagtct
cctgcggtcggaagtggagcttcaactaatacaggaggcaatgcagggaacaaaaagggg
ggaagtaaggaccctaaacaaggcaatcttctatcattctttaagagggtctga
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