Ricinus communis (castor bean): 8288383
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Entry
8288383 CDS
T01087
Name
(RefSeq) heat stress transcription factor A-3
KO
K09419
heat shock transcription factor, other eukaryote
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8288383
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
8288383
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CCDC85
TMCO5
COG6_N
TOP_N
Spc24
Motif
Other DBs
NCBI-GeneID:
8288383
NCBI-ProteinID:
XP_015580500
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Position
10:15794474..15797162
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AA seq
517 aa
AA seq
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MNPEDEKSFKPTDSGTTSSSSNSEPDKPLMGSSQFYPSVSPFSSPLMEVFEFRANTISPT
DDDDMAAEVPQPLANLHENPIPPFLSKTYDLVNDRILDPIISWGSTGESFVVWDPVEFSR
VVLPRNFKHNNFSSFVRQLNTYGFRKIDSDKWEFANEAFRRGKRHLLKNIQRRKPLQSQQ
VGSYTGPPIETGLSELESEIEILRKQRSMMMQEVVELQQQQRGSVHHMKTVNRRLQAAEQ
RQKQMVSFLAKLFQNPAFLARLRQNKEQGNIGSSRMKYVKHQQLEPGQSESRLEGQVVKY
RPEWKDVPLSSLVPDINPASFKQSPDYNLQDMLETGEEAVGMAFPIENVPLDEVAILDEL
VVAQGCIQNPAQYGEGASNMRTEDPQFKGKNIMNPQQEVGPEYFIAFPEDLVAEKDFPEF
SSPAIDSIVKQEDVWNMEFDPQAYMPSSSQELWGNLVPYDVPELGSSAGFSDIWGLGSLQ
AAGSSGIHKRPADENPTAKLEGHADQLKDDSLKNIDQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaagatgagaaatcatttaaacctacagattccggtacaacttcttcttct
tccaattcagaacccgacaagccattaatgggcagttctcaattttacccttctgtgtct
ccattttcttctcctttaatggaggtatttgaattcagagcaaacaccatatctcctact
gatgatgatgacatggcagcggaagtgcctcagccacttgcaaacttacatgagaatcca
ataccgccgtttttgtcgaaaacttatgatttggtgaatgatcggatacttgacccgata
atctcatggggctccacaggagagagctttgtggtttgggacccagtggagttctctaga
gttgttcttcccaggaatttcaagcataacaatttctcaagttttgtcaggcaactcaat
acttatggatttcgcaagattgatagtgataagtgggaatttgccaatgaagctttcagg
cgaggcaagaggcatctgttaaaaaatattcagaggcgcaaaccgttgcaatctcagcag
gttgggagctatactgggcctcctattgaaacagggttatcagaactggaaagtgaaata
gaaatattgaggaaacagaggagtatgatgatgcaggaggttgtagaactgcagcagcag
cagcgtggatctgttcatcatatgaaaacagtgaatcggaggcttcaggcagcagagcag
aggcaaaagcagatggtttcatttttggcaaagttgtttcagaatccagcattcttggcc
cgtcttaggcaaaacaaggaacaagggaatattggttcatcgaggatgaagtatgtcaag
caccagcaacttgaaccaggtcaatcagaatcacgtttggaagggcaggttgtgaagtac
agacctgaatggaaagatgtcccattatcttccctggtcccagatataaatcctgcttcc
tttaaacaatctcctgattacaacttacaagacatgctagaaactggtgaggaagcagta
ggcatggcatttccaattgagaatgttccattagatgaggttgccatactggatgagcta
gtagtggcacaaggctgtatccaaaaccctgctcaatatggagaaggggcatcaaacatg
agaactgaagatccccagtttaaaggaaagaatattatgaatccacaacaggaagttggt
cccgaatatttcattgcttttcctgaggatttggtggcagagaaggattttccagaattc
tcatcgcctgcaattgatagtattgttaagcaagaggatgtgtggaacatggaatttgac
ccccaagcttacatgcctagttctagccaagaattatggggtaatcttgtcccctatgat
gtgccagaattaggatcaagtgctggtttctcagatatctggggtttaggttctctacaa
gcagcaggaagttcaggcattcataagcggccggctgatgaaaaccctactgccaagctt
gagggtcatgctgaccagctgaaggatgatagcttaaagaatatagatcaatag
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